Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 DBIP1-201ENST00000401435 260 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 GAPDHP42-201ENST00000406848 981 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 RNU6-584P-201ENST00000410350 95 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 NAP1L4P2-201ENST00000425958 899 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 MTND6P12-201ENST00000428247 522 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC073069.1-201ENST00000428657 441 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC090018.1-201ENST00000434369 367 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC002504.1-201ENST00000438281 691 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AL592437.1-201ENST00000443781 492 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 RPL7P32-201ENST00000457119 744 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 RNA5SP303-201ENST00000516192 130 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC010306.1-201ENST00000523223 1117 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 MORF4L1P3-201ENST00000525966 950 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC023824.3-201ENST00000569003 562 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC124856.1-201ENST00000600819 896 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 Z82195.1-201ENST00000604558 398 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC013468.1-201ENST00000608680 598 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 AC016717.3-201ENST00000624730 554 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 AL590396.4-201ENST00000636779 956 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.5□□□□□ -1.53
CCDC38Q502W7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC38Q502W7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CCDC38Q502W7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AL445437.1-201ENST00000623157 3087 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AL138820.1-201ENST00000617901 5305 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 RNU1-19P-201ENST00000363306 165 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 OR52E6-202ENST00000379946 954 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 MIR525-201ENST00000384978 85 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC093719.1-202ENST00000392735 373 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AL078599.1-201ENST00000402075 293 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 USP9YP21-201ENST00000420603 432 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 NANOGP4-201ENST00000427230 913 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AP001324.1-201ENST00000428553 399 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 RPL12P17-201ENST00000432393 498 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC004854.1-201ENST00000440356 349 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 CDC42P1-201ENST00000456658 548 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 SETP20-201ENST00000457046 852 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AL591473.1-201ENST00000464297 313 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 RPL23AP71-201ENST00000470966 469 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC090638.1-201ENST00000498296 909 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 GTF2IP9-201ENST00000502460 301 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 TRAV31-201ENST00000502780 342 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 HPRT1P2-201ENST00000505250 544 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 RNU6-276P-201ENST00000516114 96 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 BNIP3P1-201ENST00000547295 580 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC090751.1-201ENST00000566966 267 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 AC010547.6-201ENST00000571789 193 ntBASIC5.49□□□□□ -1.53
CCDC38Q502W7 RN7SL339P-201ENST00000580597 296 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms