Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL935212.3-201ENST00000450729 284 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 RPL10P17-201ENST00000453852 316 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 MTND2P28-201ENST00000457540 1044 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 RPS23P7-201ENST00000466210 444 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC112206.4-201ENST00000515142 405 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 MIR4277-201ENST00000578298 84 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 MIR4697-201ENST00000582977 78 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC026790.2-201ENST00000606282 430 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 BNIP3P41-202ENST00000616656 861 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AL162233.1-201ENST00000620014 944 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC015804.1-201ENST00000622935 435 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AL356490.1-201ENST00000623079 479 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 STX3-208ENST00000641815 3236 ntBASIC5.55□□□□□ -1.52
PDS5AQ29RF7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDS5AQ29RF7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 RNU6-386P-201ENST00000362650 107 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 RPL23AP59-201ENST00000399415 461 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 RNU4-25P-201ENST00000410569 230 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL512504.1-201ENST00000415494 778 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC004690.1-201ENST00000418216 328 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 CHIAP3-201ENST00000423668 1133 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AJ239321.1-201ENST00000424255 564 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 OR2AH1P-201ENST00000425717 928 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 RPL17P35-201ENST00000432217 549 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 TRBV8-1-201ENST00000481590 279 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 HMGB3P16-201ENST00000508037 287 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC104997.1-201ENST00000519761 717 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL136520.1-202ENST00000555494 763 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC015912.2-201ENST00000571053 181 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC023762.1-201ENST00000603280 584 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL121873.1-201ENST00000616013 524 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL035461.2-201ENST00000619201 524 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AL359757.1-201ENST00000623176 255 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 CPHL1P-201ENST00000461341 3407 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 SALL4P2-201ENST00000423288 2910 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 AC019072.1-201ENST00000604535 1551 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.54□□□□□ -1.52
PDS5AQ29RF7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.54□□□□□ -1.52
PDS5AQ29RF7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 RPL7AP25-201ENST00000423357 805 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 HPRT1P1-201ENST00000509498 657 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AP005262.1-201ENST00000582646 997 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC090948.1-201ENST00000607464 549 ntBASIC5.53□□□□□ -1.52
PDS5AQ29RF7 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.53□□□□□ -1.52
PDS5AQ29RF7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms