Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AL713922.2-201ENST00000619384 716 ntBASIC3.97□□□□□ -1.77
USF2Q15853 C2orf27A-204ENST00000623058 969 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AC135068.12-201ENST00000637370 931 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL049767.1-202ENST00000637826 242 ntBASIC3.97□□□□□ -1.77
USF2Q15853 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.97□□□□□ -1.77
USF2Q15853 SPATA2P1-201ENST00000431223 2055 ntBASIC3.97□□□□□ -1.77
USF2Q15853 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC3.97□□□□□ -1.77
USF2Q15853 AC096656.1-201ENST00000623826 1364 ntBASIC3.97□□□□□ -1.77
USF2Q15853 AL118496.1-201ENST00000440201 1812 ntBASIC3.97□□□□□ -1.77
USF2Q15853 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
USF2Q15853 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USF2Q15853 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.96□□□□□ -1.77
USF2Q15853 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.96□□□□□ -1.77
USF2Q15853 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
USF2Q15853 MTCO1P11-201ENST00000429111 1528 ntBASIC3.96□□□□□ -1.78
USF2Q15853 MARK2P15-201ENST00000432204 2186 ntBASIC3.96□□□□□ -1.78
USF2Q15853 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 RNU6-666P-201ENST00000363499 107 ntBASIC3.96□□□□□ -1.78
USF2Q15853 RNA5SP513-201ENST00000364648 118 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC009804.1-201ENST00000400949 179 ntBASIC3.96□□□□□ -1.78
USF2Q15853 GSTM3P2-201ENST00000412746 530 ntBASIC3.96□□□□□ -1.78
USF2Q15853 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC3.96□□□□□ -1.78
USF2Q15853 AL513325.1-201ENST00000417716 1034 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC092832.1-201ENST00000422934 400 ntBASIC3.96□□□□□ -1.78
USF2Q15853 EI24P4-201ENST00000423683 1078 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AL121776.1-201ENST00000429337 372 ntBASIC3.96□□□□□ -1.78
USF2Q15853 RPL7AP61-201ENST00000443410 636 ntBASIC3.96□□□□□ -1.78
USF2Q15853 C1DP3-201ENST00000455013 423 ntBASIC3.96□□□□□ -1.78
USF2Q15853 Z92846.1-201ENST00000456203 268 ntBASIC3.96□□□□□ -1.78
USF2Q15853 RN7SL517P-201ENST00000462240 305 ntBASIC3.96□□□□□ -1.78
USF2Q15853 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.96□□□□□ -1.78
USF2Q15853 RN7SL184P-201ENST00000488308 297 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC012170.1-201ENST00000495139 359 ntBASIC3.96□□□□□ -1.78
USF2Q15853 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.96□□□□□ -1.78
USF2Q15853 RPL7L1P4-201ENST00000513004 707 ntBASIC3.96□□□□□ -1.78
USF2Q15853 RNA5SP154-201ENST00000516193 111 ntBASIC3.96□□□□□ -1.78
USF2Q15853 SCARNA21.2-201ENST00000516600 166 ntBASIC3.96□□□□□ -1.78
USF2Q15853 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 HIGD1AP18-201ENST00000520730 278 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.96□□□□□ -1.78
USF2Q15853 RFPL1S-203ENST00000539579 330 ntBASIC3.96□□□□□ -1.78
USF2Q15853 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.96□□□□□ -1.78
USF2Q15853 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.96□□□□□ -1.78
USF2Q15853 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.96□□□□□ -1.78
USF2Q15853 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 AC020978.7-201ENST00000575953 1187 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 AP001180.3-201ENST00000582221 145 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC3.96□□□□□ -1.78
USF2Q15853 NF1P5-201ENST00000588287 448 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC067852.4-201ENST00000590314 478 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC3.96□□□□□ -1.78
USF2Q15853 AP003117.1-201ENST00000602771 554 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC069307.1-201ENST00000602820 447 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC008536.1-201ENST00000602872 669 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AL589674.2-201ENST00000604304 337 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC010680.4-201ENST00000605334 543 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AP000894.4-201ENST00000610185 483 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC004477.3-201ENST00000614061 590 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC007204.2-201ENST00000615022 616 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AL121873.1-201ENST00000616013 524 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AC099669.2-201ENST00000616549 437 ntBASIC3.96□□□□□ -1.78
USF2Q15853 RPL23AP61-201ENST00000623642 466 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AL672167.1-203ENST00000641299 2975 ntBASIC3.96□□□□□ -1.78
USF2Q15853 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USF2Q15853 AC017104.4-201ENST00000636283 1592 ntBASIC3.96□□□□□ -1.78
USF2Q15853 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.96□□□□□ -1.78
USF2Q15853 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USF2Q15853 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.96□□□□□ -1.78
USF2Q15853 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.95□□□□□ -1.78
USF2Q15853 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
USF2Q15853 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 AC138393.1-206ENST00000540997 1886 ntBASIC3.95□□□□□ -1.78
USF2Q15853 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
USF2Q15853 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USF2Q15853 SNORA51.1-201ENST00000363243 140 ntBASIC3.95□□□□□ -1.78
USF2Q15853 RNA5SP242-201ENST00000364171 118 ntBASIC3.95□□□□□ -1.78
USF2Q15853 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.95□□□□□ -1.78
USF2Q15853 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.95□□□□□ -1.78
USF2Q15853 SNORA67-201ENST00000384423 137 ntBASIC3.95□□□□□ -1.78
USF2Q15853 RNA5SP372-201ENST00000390836 115 ntBASIC3.95□□□□□ -1.78
USF2Q15853 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms