Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL133325.1-201ENST00000421090 382 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL034379.1-201ENST00000423216 253 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 PA2G4P6-201ENST00000438325 1197 ntBASIC4.82□□□□□ -1.64
LTBQ06643 TCEA1P3-201ENST00000443005 880 ntBASIC4.82□□□□□ -1.64
LTBQ06643 NOP56P2-201ENST00000447491 769 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC004022.1-201ENST00000447766 1066 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 AP000797.2-201ENST00000475768 606 ntBASIC4.82□□□□□ -1.64
LTBQ06643 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 AC004263.1-201ENST00000479327 332 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 RPS12P31-201ENST00000491419 398 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL049874.2-201ENST00000492636 288 ntBASIC4.82□□□□□ -1.64
LTBQ06643 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 PGAM1P13-201ENST00000507497 754 ntBASIC4.82□□□□□ -1.64
LTBQ06643 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 AC098976.1-201ENST00000513014 541 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC008126.1-201ENST00000549019 480 ntBASIC4.82□□□□□ -1.64
LTBQ06643 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC027455.1-201ENST00000574104 594 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 RBM22P1-201ENST00000578589 1214 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.82□□□□□ -1.64
LTBQ06643 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 ZNF92P3-201ENST00000596594 954 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL049844.2-201ENST00000604280 628 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC009027.1-201ENST00000604510 479 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC005252.1-201ENST00000604518 1063 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL139344.1-201ENST00000605228 195 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC012213.4-201ENST00000606457 354 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC009163.6-201ENST00000612367 342 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 AC078883.4-201ENST00000623218 367 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC079416.3-201ENST00000624479 549 ntBASIC4.82□□□□□ -1.64
LTBQ06643 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 AC083865.1-201ENST00000636634 831 ntBASIC4.82□□□□□ -1.64
LTBQ06643 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.82□□□□□ -1.64
LTBQ06643 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.82□□□□□ -1.64
LTBQ06643 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.82□□□□□ -1.64
LTBQ06643 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 PROS2P-201ENST00000474651 1951 ntBASIC4.82□□□□□ -1.64
LTBQ06643 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LTBQ06643 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LTBQ06643 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AL445523.1-201ENST00000451184 1362 ntBASIC4.81□□□□□ -1.64
LTBQ06643 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LTBQ06643 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBQ06643 AC008432.1-201ENST00000615912 1320 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 AC245100.2-201ENST00000454544 1679 ntBASIC4.81□□□□□ -1.64
LTBQ06643 OR9G4-201ENST00000302957 984 ntBASIC4.81□□□□□ -1.64
LTBQ06643 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LTBQ06643 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.81□□□□□ -1.64
LTBQ06643 RNA5SP305-201ENST00000362665 119 ntBASIC4.81□□□□□ -1.64
LTBQ06643 RNA5SP335-201ENST00000363817 110 ntBASIC4.81□□□□□ -1.64
LTBQ06643 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBQ06643 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LTBQ06643 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LTBQ06643 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 TAF9BP2-201ENST00000400856 499 ntBASIC4.81□□□□□ -1.64
LTBQ06643 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.81□□□□□ -1.64
LTBQ06643 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AC093422.3-201ENST00000428506 305 ntBASIC4.81□□□□□ -1.64
LTBQ06643 MTCO1P43-201ENST00000431831 488 ntBASIC4.81□□□□□ -1.64
LTBQ06643 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 AL049745.1-201ENST00000433953 286 ntBASIC4.81□□□□□ -1.64
LTBQ06643 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.81□□□□□ -1.64
LTBQ06643 GAPDHP25-201ENST00000447061 1001 ntBASIC4.81□□□□□ -1.64
LTBQ06643 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.81□□□□□ -1.64
LTBQ06643 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.81□□□□□ -1.64
LTBQ06643 RN7SL738P-201ENST00000470264 297 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC083982.1-201ENST00000485679 344 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC016559.2-201ENST00000510759 359 ntBASIC4.81□□□□□ -1.64
LTBQ06643 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.81□□□□□ -1.64
LTBQ06643 Y_RNA.688-201ENST00000516565 95 ntBASIC4.81□□□□□ -1.64
LTBQ06643 RNA5SP373-201ENST00000517271 95 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms