Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.11□□□□□ -1.75
H3F3AP84243 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.11□□□□□ -1.75
H3F3AP84243 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 AC023762.1-201ENST00000603280 584 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 AC004948.1-201ENST00000609858 672 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
H3F3AP84243 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 HSPA8P17-201ENST00000427029 1382 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 DHX40P1-201ENST00000588725 1412 ntBASIC4.11□□□□□ -1.75
H3F3AP84243 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
H3F3AP84243 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
H3F3AP84243 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
H3F3AP84243 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
H3F3AP84243 SNORA71.2-201ENST00000364941 134 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 MIR937-201ENST00000401271 86 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 LAP3P1-201ENST00000403648 294 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AL512430.2-201ENST00000406786 339 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AC009237.10-201ENST00000414112 510 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.1□□□□□ -1.75
H3F3AP84243 AL590609.2-201ENST00000421430 368 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.1□□□□□ -1.75
H3F3AP84243 Z80107.2-201ENST00000445127 392 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 MTND4LP12-201ENST00000448237 295 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.1□□□□□ -1.75
H3F3AP84243 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.1□□□□□ -1.75
H3F3AP84243 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.1□□□□□ -1.75
H3F3AP84243 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.1□□□□□ -1.75
H3F3AP84243 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.1□□□□□ -1.75
H3F3AP84243 AP000827.1-201ENST00000527814 258 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 GLRXP2-201ENST00000555594 321 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 CD24P2-201ENST00000565486 219 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 HMGB2P1-201ENST00000591146 634 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 AL133338.2-201ENST00000604292 736 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AL133406.3-201ENST00000606817 541 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 uc_338.18-201ENST00000615451 175 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 MIR7703-201ENST00000620784 77 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 AC021106.3-201ENST00000623925 531 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 AC012618.3-205ENST00000637896 1496 ntBASIC4.1□□□□□ -1.75
H3F3AP84243 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
H3F3AP84243 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
H3F3AP84243 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
H3F3AP84243 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
H3F3AP84243 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.09□□□□□ -1.75
H3F3AP84243 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 OR1F12-201ENST00000402365 945 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 AL589994.1-201ENST00000404962 340 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 AC092570.3-201ENST00000420113 693 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 OR2X1P-201ENST00000421144 687 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC011753.3-201ENST00000443436 406 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 AL162591.2-201ENST00000449634 317 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC005008.1-201ENST00000456151 612 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 RPS29P22-201ENST00000472363 168 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 RNA5SP446-201ENST00000515955 82 ntBASIC4.09□□□□□ -1.75
H3F3AP84243 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.09□□□□□ -1.75
H3F3AP84243 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.09□□□□□ -1.75
H3F3AP84243 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.09□□□□□ -1.75
H3F3AP84243 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.09□□□□□ -1.75
H3F3AP84243 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.09□□□□□ -1.75
H3F3AP84243 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
H3F3AP84243 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms