Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CX3CL1P78423 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 AL078621.3-201ENST00000623707 2042 ntBASIC4.29□□□□□ -1.72
CX3CL1P78423 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.29□□□□□ -1.72
CX3CL1P78423 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CX3CL1P78423 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 ZNF29P-201ENST00000225587 168 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 DBIP1-201ENST00000401435 260 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AL133388.1-201ENST00000404509 287 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 SNORA11C-201ENST00000408532 129 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 RNU2-6P-201ENST00000411404 190 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 SETP15-201ENST00000412724 337 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 TRGV6-201ENST00000417928 299 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC092634.2-201ENST00000428146 1010 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC073069.1-201ENST00000428657 441 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 HSPD1P12-201ENST00000429127 1069 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 DYNLL1P7-201ENST00000429273 258 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 PPIAP13-201ENST00000434706 478 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AL136038.1-201ENST00000497246 351 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 HMGN1P9-201ENST00000515212 298 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.28□□□□□ -1.72
CX3CL1P78423 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 IGKV3D-34-201ENST00000522638 302 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC010306.1-201ENST00000523223 1117 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AP004607.2-201ENST00000533949 322 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 BLZF2P-201ENST00000553776 1130 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 MTCYBP23-201ENST00000558717 1102 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC090751.1-201ENST00000566966 267 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.28□□□□□ -1.72
CX3CL1P78423 DPRXP4-201ENST00000578053 568 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 MTCYBP13-201ENST00000578634 1093 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 RN7SL356P-201ENST00000582228 248 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AP001160.4-201ENST00000596971 382 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC108738.1-201ENST00000603703 237 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC009027.1-201ENST00000604510 479 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC243654.2-201ENST00000612843 443 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC109583.2-201ENST00000617367 129 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC116563.2-201ENST00000624751 535 ntBASIC4.28□□□□□ -1.72
CX3CL1P78423 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.28□□□□□ -1.72
CX3CL1P78423 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CX3CL1P78423 MTCO1P6-201ENST00000481192 1384 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 RNA5SP335-201ENST00000363817 110 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 RNA5SP435-201ENST00000364044 108 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC007618.1-201ENST00000366455 732 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.27□□□□□ -1.73
CX3CL1P78423 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
CX3CL1P78423 RNU6-549P-201ENST00000384433 107 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 MIR143-201ENST00000385300 106 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CX3CL1P78423 RPL21P67-201ENST00000402896 478 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 AC114814.2-201ENST00000419195 485 ntBASIC4.27□□□□□ -1.73
CX3CL1P78423 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CX3CL1P78423 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms