Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC068228.1-201ENST00000461723 211 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC023194.2-201ENST00000465398 406 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC104339.1-201ENST00000465478 348 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC128716.1-201ENST00000475129 166 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC109486.1-201ENST00000486833 374 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 CBX3P3-201ENST00000508108 532 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 ATP1B1P1-201ENST00000509767 915 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 RN7SKP31-201ENST00000516354 278 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 MIR2117-201ENST00000516780 80 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.25□□□□□ -1.57
CLRN1P58418 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.25□□□□□ -1.57
CLRN1P58418 PCNPP1-201ENST00000552501 511 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 RPA2P1-201ENST00000556557 721 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.25□□□□□ -1.57
CLRN1P58418 AP005119.1-201ENST00000580956 292 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 AP003465.2-201ENST00000602571 373 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC133552.5-201ENST00000604266 540 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC112220.3-201ENST00000605502 502 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AL031775.1-201ENST00000607014 887 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 AL139099.4-201ENST00000614802 114 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC015540.1-201ENST00000615828 501 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC009509.4-201ENST00000619202 509 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AL031667.3-201ENST00000620124 655 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AC073592.6-201ENST00000624271 415 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 AP000550.3-201ENST00000637734 379 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
CLRN1P58418 PARP4P2-201ENST00000446672 3326 ntBASIC5.25□□□□□ -1.57
CLRN1P58418 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.25□□□□□ -1.57
CLRN1P58418 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLRN1P58418 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 RNF6P1-201ENST00000444889 1784 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL360270.2-201ENST00000562952 5985 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 COX6B1P3-201ENST00000312310 260 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 Y_RNA.3-201ENST00000362331 103 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RNU5D-1-201ENST00000363299 116 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RNU1-65P-201ENST00000363919 148 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLRN1P58418 RNU6-517P-201ENST00000384362 110 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RNU2-16P-201ENST00000410712 136 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 ELOCP17-201ENST00000414751 326 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 IPPKP1-201ENST00000422501 768 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 USP24P1-201ENST00000433802 779 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC008072.1-201ENST00000434254 824 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 PNKDP1-201ENST00000435914 430 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 PPIAP17-201ENST00000438507 471 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 YRDCP3-201ENST00000456507 480 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RN7SL269P-201ENST00000467795 305 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC099521.1-201ENST00000482557 334 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 RPL38P3-201ENST00000484463 213 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AL117692.1-201ENST00000494283 713 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 IGBP1P5-201ENST00000507524 1000 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC079140.3-201ENST00000511111 550 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.24□□□□□ -1.57
CLRN1P58418 SNORA81.2-201ENST00000516868 170 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 WBP1LP3-201ENST00000523033 208 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.24□□□□□ -1.57
CLRN1P58418 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.24□□□□□ -1.57
CLRN1P58418 AP002963.1-201ENST00000530590 184 ntBASIC5.24□□□□□ -1.57
CLRN1P58418 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.24□□□□□ -1.57
CLRN1P58418 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 248.3 ms