Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC023762.1-201ENST00000603280 584 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 GMCL1P2-201ENST00000605230 823 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AL391597.1-201ENST00000618707 694 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 AL669942.2-201ENST00000620352 697 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
PKNOX1P55347 AC007342.9-201ENST00000623877 1385 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.5□□□□□ -1.69
PKNOX1P55347 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PKNOX1P55347 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 AL356317.1-201ENST00000396110 1436 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 RNA5SP507-201ENST00000363603 121 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 RNA5SP105-201ENST00000391123 113 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 Z98745.1-201ENST00000402553 494 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.49□□□□□ -1.69
PKNOX1P55347 AL691447.1-201ENST00000419456 387 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 NRBF2P3-201ENST00000432731 865 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AC097523.2-201ENST00000435551 652 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 PTMAP3-201ENST00000447474 330 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 OR1H1P-201ENST00000448731 937 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AL935212.3-201ENST00000450729 284 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 HMGN1P8-201ENST00000463578 288 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.49□□□□□ -1.69
PKNOX1P55347 IGLV2-28-201ENST00000520681 304 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 AC021006.3-201ENST00000530771 192 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 HMGN2P6-201ENST00000551091 273 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.49□□□□□ -1.69
PKNOX1P55347 EDDM3DP-201ENST00000554692 434 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 BGLT3-201ENST00000564523 994 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.49□□□□□ -1.69
PKNOX1P55347 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.49□□□□□ -1.69
PKNOX1P55347 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.49□□□□□ -1.69
PKNOX1P55347 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.49□□□□□ -1.69
PKNOX1P55347 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 C4BPAP1-201ENST00000415474 1893 ntBASIC4.49□□□□□ -1.69
PKNOX1P55347 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PKNOX1P55347 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC091046.3-201ENST00000631455 1574 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
PKNOX1P55347 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
PKNOX1P55347 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PKNOX1P55347 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PKNOX1P55347 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PKNOX1P55347 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PKNOX1P55347 AL450326.2-201ENST00000421913 1962 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PKNOX1P55347 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PKNOX1P55347 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.48□□□□□ -1.69
PKNOX1P55347 RNU6-891P-201ENST00000384280 111 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC240504.1-201ENST00000395709 845 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 SNORA11.3-201ENST00000408471 128 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 RPL23AP27-201ENST00000415161 451 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC140479.3-201ENST00000418944 1126 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 HMGB1P32-201ENST00000425971 565 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC108463.1-201ENST00000450258 347 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 ISCUP1-201ENST00000454451 448 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 C1DP3-201ENST00000455013 423 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 RPL31P53-201ENST00000457065 348 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 MTND3P6-201ENST00000485242 339 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC147055.3-201ENST00000510547 851 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC090151.1-201ENST00000520784 730 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC018442.3-201ENST00000523025 183 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AL353726.1-201ENST00000614041 1000 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 SNORA11.6-201ENST00000619030 128 ntBASIC4.48□□□□□ -1.69
PKNOX1P55347 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PKNOX1P55347 AC125257.1-201ENST00000560400 2930 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms