Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 AC107952.2-201ENST00000606048 486 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.83□□□□□ -1.64
CDH12P55289 AC010245.2-201ENST00000606908 1167 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL135786.2-201ENST00000608422 615 ntBASIC4.83□□□□□ -1.64
CDH12P55289 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 AC013468.1-201ENST00000608680 598 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AC097478.2-201ENST00000610572 514 ntBASIC4.83□□□□□ -1.64
CDH12P55289 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.83□□□□□ -1.64
CDH12P55289 AC037198.3-201ENST00000616754 526 ntBASIC4.83□□□□□ -1.64
CDH12P55289 MIR6778-201ENST00000617912 73 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AL121895.2-201ENST00000619558 447 ntBASIC4.83□□□□□ -1.64
CDH12P55289 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AC127024.6-201ENST00000621598 424 ntBASIC4.83□□□□□ -1.64
CDH12P55289 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 LINC01808-202ENST00000641680 1116 ntBASIC4.83□□□□□ -1.64
CDH12P55289 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.83□□□□□ -1.64
CDH12P55289 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CDH12P55289 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH12P55289 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 TMSB4XP4-201ENST00000323496 618 ntBASIC4.82□□□□□ -1.64
CDH12P55289 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH12P55289 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
CDH12P55289 RNU4-68P-201ENST00000364314 141 ntBASIC4.82□□□□□ -1.64
CDH12P55289 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 Y_RNA.472-201ENST00000384322 102 ntBASIC4.82□□□□□ -1.64
CDH12P55289 SNORD116-12-201ENST00000384468 92 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-1320P-201ENST00000390838 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-1269P-201ENST00000391139 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 RNA5SP487-201ENST00000410186 122 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC013404.1-201ENST00000413068 249 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RPS7P9-201ENST00000414704 586 ntBASIC4.82□□□□□ -1.64
CDH12P55289 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH12P55289 RPS3AP37-201ENST00000419176 745 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 RPL7P34-201ENST00000433316 712 ntBASIC4.82□□□□□ -1.64
CDH12P55289 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 AP000281.1-201ENST00000444036 316 ntBASIC4.82□□□□□ -1.64
CDH12P55289 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 AL050341.1-201ENST00000447743 313 ntBASIC4.82□□□□□ -1.64
CDH12P55289 MRPL35P2-201ENST00000448009 511 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AL035407.2-201ENST00000454090 378 ntBASIC4.82□□□□□ -1.64
CDH12P55289 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-599P-201ENST00000459383 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-1193P-201ENST00000459461 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RPL35AP19-201ENST00000469425 329 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC037198.2-201ENST00000478845 733 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC079203.1-201ENST00000487972 404 ntBASIC4.82□□□□□ -1.64
CDH12P55289 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 AC006427.1-201ENST00000514359 712 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.82□□□□□ -1.64
CDH12P55289 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.82□□□□□ -1.64
CDH12P55289 AC023824.3-201ENST00000569003 562 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC011840.5-201ENST00000582125 771 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC008521.2-201ENST00000591021 259 ntBASIC4.82□□□□□ -1.64
CDH12P55289 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 AL035411.2-201ENST00000604022 421 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNA5SP440-201ENST00000612665 119 ntBASIC4.82□□□□□ -1.64
CDH12P55289 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-368P-201ENST00000620928 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 RNU6-538P-201ENST00000622329 107 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AL691477.1-201ENST00000624398 162 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CDH12P55289 OR8A1-204ENST00000642111 1145 ntBASIC4.82□□□□□ -1.64
CDH12P55289 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.82□□□□□ -1.64
CDH12P55289 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH12P55289 AC000374.1-201ENST00000434698 1745 ntBASIC4.82□□□□□ -1.64
CDH12P55289 CCT8P1-201ENST00000413611 1657 ntBASIC4.82□□□□□ -1.64
CDH12P55289 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
CDH12P55289 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH12P55289 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms