Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH4P55283 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH4P55283 SCN1A-220ENST00000641603 12506 ntBASIC4.76□□□□□ -1.65
CDH4P55283 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 AC010132.2-201ENST00000295493 1043 ntBASIC4.76□□□□□ -1.65
CDH4P55283 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 RPL26P29-201ENST00000415623 438 ntBASIC4.76□□□□□ -1.65
CDH4P55283 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH4P55283 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH4P55283 MTND4LP13-201ENST00000425022 298 ntBASIC4.76□□□□□ -1.65
CDH4P55283 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH4P55283 AL162591.2-201ENST00000449634 317 ntBASIC4.76□□□□□ -1.65
CDH4P55283 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CDH4P55283 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
CDH4P55283 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH4P55283 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH4P55283 AC135352.1-201ENST00000506173 1418 ntBASIC4.76□□□□□ -1.65
CDH4P55283 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH4P55283 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH4P55283 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH4P55283 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH4P55283 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CDH4P55283 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH4P55283 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH4P55283 AL731566.1-201ENST00000620490 1937 ntBASIC4.76□□□□□ -1.65
CDH4P55283 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH4P55283 Z95327.2-201ENST00000414579 1873 ntBASIC4.75□□□□□ -1.65
CDH4P55283 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
CDH4P55283 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH4P55283 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 RN7SKP224-201ENST00000364140 325 ntBASIC4.75□□□□□ -1.65
CDH4P55283 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH4P55283 AL592291.1-201ENST00000403830 352 ntBASIC4.75□□□□□ -1.65
CDH4P55283 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH4P55283 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AC022022.1-201ENST00000430304 178 ntBASIC4.75□□□□□ -1.65
CDH4P55283 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AP000936.3-201ENST00000438127 255 ntBASIC4.75□□□□□ -1.65
CDH4P55283 CEACAMP9-201ENST00000442990 513 ntBASIC4.75□□□□□ -1.65
CDH4P55283 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH4P55283 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 RN7SL738P-201ENST00000470264 297 ntBASIC4.75□□□□□ -1.65
CDH4P55283 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.75□□□□□ -1.65
CDH4P55283 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 RNU6-319P-201ENST00000516025 108 ntBASIC4.75□□□□□ -1.65
CDH4P55283 RNA5SP228-201ENST00000516232 133 ntBASIC4.75□□□□□ -1.65
CDH4P55283 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH4P55283 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.75□□□□□ -1.65
CDH4P55283 AC012213.4-201ENST00000606457 354 ntBASIC4.75□□□□□ -1.65
CDH4P55283 AC023813.4-201ENST00000607580 580 ntBASIC4.75□□□□□ -1.65
CDH4P55283 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH4P55283 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH4P55283 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH4P55283 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH4P55283 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CDH4P55283 OR14L1P-202ENST00000641545 3009 ntBASIC4.75□□□□□ -1.65
CDH4P55283 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH4P55283 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CDH4P55283 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH4P55283 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDH4P55283 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH4P55283 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH4P55283 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH4P55283 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms