Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 OR4K17-201ENST00000315543 1032 ntBASIC4.81□□□□□ -1.64
PDX1P52945 SNORA63.3-201ENST00000362682 132 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-609P-201ENST00000365459 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
PDX1P52945 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-1320P-201ENST00000390838 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-1269P-201ENST00000391139 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
PDX1P52945 PCNPP4-201ENST00000414817 517 ntBASIC4.81□□□□□ -1.64
PDX1P52945 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 AC069213.2-201ENST00000420238 366 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.81□□□□□ -1.64
PDX1P52945 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 PTP4A1P3-201ENST00000433661 420 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AL359265.2-201ENST00000434367 631 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 RPS29P9-201ENST00000440360 171 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNFT1P2-201ENST00000443064 757 ntBASIC4.81□□□□□ -1.64
PDX1P52945 CALM1P2-201ENST00000452941 448 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-599P-201ENST00000459383 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-1193P-201ENST00000459461 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RN7SL443P-201ENST00000464331 290 ntBASIC4.81□□□□□ -1.64
PDX1P52945 NDUFA5P9-201ENST00000472609 340 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC011005.3-201ENST00000491624 395 ntBASIC4.81□□□□□ -1.64
PDX1P52945 PRELID3BP5-201ENST00000508612 460 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 MTCYBP19-201ENST00000517463 1124 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 AC087888.1-201ENST00000550884 1254 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.81□□□□□ -1.64
PDX1P52945 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 AC068020.1-201ENST00000594215 661 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC130352.1-201ENST00000602979 661 ntBASIC4.81□□□□□ -1.64
PDX1P52945 ABI1P1-201ENST00000603375 1120 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC020910.3-201ENST00000603701 874 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC005377.1-201ENST00000605126 456 ntBASIC4.81□□□□□ -1.64
PDX1P52945 AC120053.1-201ENST00000607706 736 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-368P-201ENST00000620928 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 RNU6-538P-201ENST00000622329 107 ntBASIC4.81□□□□□ -1.64
PDX1P52945 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.81□□□□□ -1.64
PDX1P52945 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.81□□□□□ -1.64
PDX1P52945 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.81□□□□□ -1.64
PDX1P52945 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PDX1P52945 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDX1P52945 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.81□□□□□ -1.64
PDX1P52945 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 Z98755.1-201ENST00000407015 1384 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AC083899.2-201ENST00000423285 1376 ntBASIC4.8□□□□□ -1.64
PDX1P52945 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 AL136520.1-201ENST00000600311 1322 ntBASIC4.8□□□□□ -1.64
PDX1P52945 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 SNORA2.3-201ENST00000383920 135 ntBASIC4.8□□□□□ -1.64
PDX1P52945 RNA5SP332-201ENST00000391063 115 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AL021331.1-201ENST00000402817 582 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AL390316.1-201ENST00000406279 553 ntBASIC4.8□□□□□ -1.64
PDX1P52945 RN7SKP16-201ENST00000410180 299 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.8□□□□□ -1.64
PDX1P52945 BX119904.1-201ENST00000432026 348 ntBASIC4.8□□□□□ -1.64
PDX1P52945 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.8□□□□□ -1.64
PDX1P52945 AL158053.1-201ENST00000441503 453 ntBASIC4.8□□□□□ -1.64
PDX1P52945 RPL23AP23-201ENST00000452590 471 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AC021660.1-201ENST00000465006 554 ntBASIC4.8□□□□□ -1.64
PDX1P52945 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 NPM1P17-201ENST00000479221 602 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.8□□□□□ -1.64
PDX1P52945 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.8□□□□□ -1.64
PDX1P52945 IGHV3-63-201ENST00000518422 341 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.8□□□□□ -1.64
PDX1P52945 UBTFL9-201ENST00000534504 1148 ntBASIC4.8□□□□□ -1.64
PDX1P52945 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PDX1P52945 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.8□□□□□ -1.64
PDX1P52945 AC021483.2-201ENST00000567415 758 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AC009852.2-201ENST00000567898 485 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.8□□□□□ -1.64
PDX1P52945 CBX3P2-202ENST00000583365 535 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.8□□□□□ -1.64
PDX1P52945 AC011453.2-201ENST00000603737 729 ntBASIC4.8□□□□□ -1.64
PDX1P52945 AP001521.2-201ENST00000608772 546 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms