Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 COX6B1P3-201ENST00000312310 260 ntBASIC4.81□□□□□ -1.64
SOX2P48431 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 SNORA11C-201ENST00000408532 129 ntBASIC4.81□□□□□ -1.64
SOX2P48431 RN7SKP86-201ENST00000410454 332 ntBASIC4.81□□□□□ -1.64
SOX2P48431 RNU6-77P-201ENST00000410554 91 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 AK4P4-201ENST00000419465 646 ntBASIC4.81□□□□□ -1.64
SOX2P48431 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 AC006960.1-201ENST00000419980 153 ntBASIC4.81□□□□□ -1.64
SOX2P48431 GNG5P5-201ENST00000420444 220 ntBASIC4.81□□□□□ -1.64
SOX2P48431 USP9YP26-201ENST00000421008 661 ntBASIC4.81□□□□□ -1.64
SOX2P48431 BX323845.3-201ENST00000428215 527 ntBASIC4.81□□□□□ -1.64
SOX2P48431 MTCO1P3-201ENST00000429327 192 ntBASIC4.81□□□□□ -1.64
SOX2P48431 FAM96AP1-201ENST00000430879 482 ntBASIC4.81□□□□□ -1.64
SOX2P48431 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 MTND1P32-201ENST00000433043 938 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AC090018.1-201ENST00000434369 367 ntBASIC4.81□□□□□ -1.64
SOX2P48431 NDUFS5P5-201ENST00000437256 321 ntBASIC4.81□□□□□ -1.64
SOX2P48431 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 AC073522.1-201ENST00000483312 377 ntBASIC4.81□□□□□ -1.64
SOX2P48431 RN7SL568P-201ENST00000493069 298 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.81□□□□□ -1.64
SOX2P48431 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 IMPA1P1-201ENST00000510718 842 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AC018797.1-201ENST00000510791 255 ntBASIC4.81□□□□□ -1.64
SOX2P48431 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 SNORA70.11-201ENST00000515987 138 ntBASIC4.81□□□□□ -1.64
SOX2P48431 SNORA70.13-201ENST00000516116 138 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.81□□□□□ -1.64
SOX2P48431 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.81□□□□□ -1.64
SOX2P48431 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 MTCYBP33-201ENST00000575007 1130 ntBASIC4.81□□□□□ -1.64
SOX2P48431 OR1E3-201ENST00000575608 948 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 MIR5010-201ENST00000582846 120 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AC008507.3-201ENST00000585753 472 ntBASIC4.81□□□□□ -1.64
SOX2P48431 VN1R88P-201ENST00000596787 292 ntBASIC4.81□□□□□ -1.64
SOX2P48431 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.81□□□□□ -1.64
SOX2P48431 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 AC063977.5-201ENST00000601044 974 ntBASIC4.81□□□□□ -1.64
SOX2P48431 AL392048.1-201ENST00000613946 534 ntBASIC4.81□□□□□ -1.64
SOX2P48431 uc_338.7-201ENST00000621834 124 ntBASIC4.81□□□□□ -1.64
SOX2P48431 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 AC007671.2-201ENST00000637344 619 ntBASIC4.81□□□□□ -1.64
SOX2P48431 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SOX2P48431 AC010266.2-201ENST00000564741 3255 ntBASIC4.81□□□□□ -1.64
SOX2P48431 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 SAMMSON-213ENST00000641336 1521 ntBASIC4.81□□□□□ -1.64
SOX2P48431 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.81□□□□□ -1.64
SOX2P48431 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.81□□□□□ -1.64
SOX2P48431 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX2P48431 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX2P48431 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX2P48431 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SOX2P48431 IGKV7-3-201ENST00000357453 298 ntBASIC4.8□□□□□ -1.64
SOX2P48431 RNU6-707P-201ENST00000364647 95 ntBASIC4.8□□□□□ -1.64
SOX2P48431 OR1L6-202ENST00000373684 1044 ntBASIC4.8□□□□□ -1.64
SOX2P48431 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SOX2P48431 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 MIR1303-201ENST00000408625 86 ntBASIC4.8□□□□□ -1.64
SOX2P48431 RN7SKP182-201ENST00000410772 298 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AL365203.2-201ENST00000423444 196 ntBASIC4.8□□□□□ -1.64
SOX2P48431 RPL21P43-201ENST00000425440 472 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AL390023.1-201ENST00000428836 262 ntBASIC4.8□□□□□ -1.64
SOX2P48431 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 AC005345.1-201ENST00000431868 217 ntBASIC4.8□□□□□ -1.64
SOX2P48431 HMGB3P24-201ENST00000433260 622 ntBASIC4.8□□□□□ -1.64
SOX2P48431 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AC006335.2-201ENST00000437993 330 ntBASIC4.8□□□□□ -1.64
SOX2P48431 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.8□□□□□ -1.64
SOX2P48431 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.8□□□□□ -1.64
SOX2P48431 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.8□□□□□ -1.64
SOX2P48431 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.8□□□□□ -1.64
SOX2P48431 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms