Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL732292.1-201ENST00000426692 226 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 MTND2P28-201ENST00000457540 1044 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 HMGN1P8-201ENST00000463578 288 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 IGLVIV-65-201ENST00000517313 360 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AC026616.1-201ENST00000523157 525 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 AL049874.4-201ENST00000557593 255 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 AL390726.5-202ENST00000564800 256 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AC010201.1-201ENST00000605051 540 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 BNIP3P7-201ENST00000605641 516 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AC019193.2-201ENST00000610012 634 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 AL121873.1-201ENST00000616013 524 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 LINC01808-202ENST00000641680 1116 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEDD4P46934 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 NXPH1-205ENST00000602349 1953 ntBASIC5.29□□□□□ -1.56
NEDD4P46934 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NEDD4P46934 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.29□□□□□ -1.56
NEDD4P46934 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 MIR195-201ENST00000385194 87 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.28□□□□□ -1.56
NEDD4P46934 NDUFA5P1-201ENST00000433858 341 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 snoU13.1-201ENST00000459157 104 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AGGF1P3-201ENST00000493675 1213 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 RNU6-362P-201ENST00000516736 90 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 RNU6-943P-201ENST00000516960 98 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AP000827.1-201ENST00000527814 258 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
NEDD4P46934 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 AC009303.3-201ENST00000591103 736 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 RPL7P50-201ENST00000600588 727 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AL353600.1-201ENST00000608148 251 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AL353726.1-201ENST00000614041 1000 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.28□□□□□ -1.56
NEDD4P46934 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 AP001002.1-201ENST00000625148 1513 ntBASIC5.28□□□□□ -1.56
NEDD4P46934 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.28□□□□□ -1.56
NEDD4P46934 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEDD4P46934 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NEDD4P46934 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NEDD4P46934 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 CASC19-204ENST00000641001 2055 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC017104.4-201ENST00000636283 1592 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 CASC19-255ENST00000641733 1385 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 IGKV7-3-201ENST00000357453 298 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RNU4-39P-201ENST00000362455 127 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RNA5SP447-201ENST00000363749 119 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NEDD4P46934 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NEDD4P46934 ARAFP1-201ENST00000422172 605 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.27□□□□□ -1.57
NEDD4P46934 CDY14P-201ENST00000431260 1014 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RPEP2-201ENST00000432149 701 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.27□□□□□ -1.57
NEDD4P46934 CDY12P-201ENST00000440679 1015 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 CDY13P-201ENST00000445813 1015 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.27□□□□□ -1.57
NEDD4P46934 CDY23P-201ENST00000451661 1014 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC012671.1-201ENST00000451912 203 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 DHFRP3-201ENST00000455595 559 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RPS27AP17-201ENST00000463344 455 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC006463.2-201ENST00000473326 348 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 TRBV8-1-201ENST00000481590 279 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RPS27AP16-201ENST00000492222 470 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 ASNSP4-201ENST00000511103 447 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 RNU6-1334P-201ENST00000516032 105 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.27□□□□□ -1.57
NEDD4P46934 AC093591.2-201ENST00000565254 3843 ntBASIC5.27□□□□□ -1.57
NEDD4P46934 AC016839.1-201ENST00000578162 867 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms