Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC073143.1-201ENST00000436316 395 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 UBE2V1P3-201ENST00000439651 417 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 EIF2S2P2-201ENST00000447161 982 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AL445433.1-201ENST00000457507 257 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AL672167.3-201ENST00000465951 960 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC016687.1-201ENST00000482574 353 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 NIP7P2-201ENST00000485801 544 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC010476.1-201ENST00000519111 851 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC020937.1-201ENST00000519677 1013 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 AC008966.2-201ENST00000606157 453 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AP002360.3-201ENST00000607673 710 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AL445423.1-201ENST00000609941 536 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 AL731566.1-201ENST00000620490 1937 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TNFSF9P41273 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 AC097063.1-201ENST00000426714 1797 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFSF9P41273 MTND5P23-201ENST00000430812 1655 ntBASIC4.83□□□□□ -1.64
TNFSF9P41273 AC020633.1-201ENST00000468439 2247 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TNFSF9P41273 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TNFSF9P41273 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.82□□□□□ -1.64
TNFSF9P41273 RNA5SP509-201ENST00000364577 119 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC068538.1-201ENST00000376856 336 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 RN7SKP167-201ENST00000411047 285 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 MTND4LP21-201ENST00000415303 295 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC004690.1-201ENST00000418216 328 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 SNRPFP2-201ENST00000440710 251 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF9P41273 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AC239798.3-201ENST00000454459 408 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC068587.1-201ENST00000483613 781 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
TNFSF9P41273 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AC008126.1-201ENST00000549019 480 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 PARP1P2-201ENST00000556806 195 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC009852.2-201ENST00000567898 485 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 SS18L2P2-201ENST00000583960 235 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AL160290.3-201ENST00000604869 165 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AL121890.3-201ENST00000618494 516 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC011944.2-201ENST00000624440 683 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.82□□□□□ -1.64
TNFSF9P41273 AC138627.1-204ENST00000641894 765 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AC090017.1-201ENST00000548612 1779 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 CASC19-204ENST00000641001 2055 ntBASIC4.82□□□□□ -1.64
TNFSF9P41273 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TNFSF9P41273 AC126323.6-202ENST00000568092 3511 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TNFSF9P41273 AC015813.6-201ENST00000624409 5808 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 MIR331-201ENST00000362302 94 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
TNFSF9P41273 RNU2-22P-201ENST00000411266 212 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 RPS20P14-201ENST00000412545 360 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 CDY14P-201ENST00000431260 1014 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 CDY12P-201ENST00000440679 1015 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 CDY13P-201ENST00000445813 1015 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 CDY23P-201ENST00000451661 1014 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF9P41273 IGKV2D-10-201ENST00000520194 281 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF9P41273 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF9P41273 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.81□□□□□ -1.64
TNFSF9P41273 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.81□□□□□ -1.64
TNFSF9P41273 ATP5J2P6-201ENST00000565203 266 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 AC010201.1-201ENST00000605051 540 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 AC096586.2-201ENST00000610260 441 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 AC022106.2-201ENST00000620114 757 ntBASIC4.81□□□□□ -1.64
TNFSF9P41273 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
TNFSF9P41273 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TNFSF9P41273 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.81□□□□□ -1.64
TNFSF9P41273 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms