Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 AL731556.1-201ENST00000394628 3711 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 Y_RNA.25-201ENST00000362528 102 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RNA5SP350-201ENST00000363298 111 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RNU6-115P-201ENST00000364310 107 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RNU4-75P-201ENST00000364621 146 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RNA5SP478-201ENST00000364657 115 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 SNORA43.1-201ENST00000364863 140 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 SNORA70H-201ENST00000383910 135 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 SNORA70J-201ENST00000384182 135 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 RNA5SP251-201ENST00000410614 137 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 TPMTP3-201ENST00000411928 735 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AL035660.1-201ENST00000422041 222 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 BX323845.3-201ENST00000428215 527 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 MTND1P34-201ENST00000438556 671 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 RPL36AP39-201ENST00000445859 318 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC243772.1-201ENST00000451620 410 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 KATNBL1P6-201ENST00000453433 915 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 RNU6-1218P-201ENST00000458990 108 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 RPL21P6-201ENST00000479171 504 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 OR4G11P-201ENST00000492842 939 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 RNU2-30P-201ENST00000516209 141 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 snoU109.6-201ENST00000516831 118 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 SNORA48.10-201ENST00000516965 160 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.05□□□□□ -1.28
ERCC3P19447 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC095055.1-201ENST00000603472 1113 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC128687.1-201ENST00000605304 619 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC243654.2-201ENST00000612843 443 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AC092192.1-201ENST00000633154 1018 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 AC105235.1-201ENST00000623208 1816 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC3P19447 MRRFP1-201ENST00000435941 1675 ntBASIC7.05□□□□□ -1.28
ERCC3P19447 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ERCC3P19447 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
ERCC3P19447 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.05□□□□□ -1.28
ERCC3P19447 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC3P19447 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC011504.1-201ENST00000623331 4103 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 RNU1-150P-201ENST00000362491 162 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC3P19447 SUGT1P1-201ENST00000379514 476 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC068533.2-201ENST00000411872 306 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL390774.1-201ENST00000411924 246 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC3P19447 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.04□□□□□ -1.28
ERCC3P19447 BX284632.2-201ENST00000421091 399 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AC093698.1-201ENST00000423843 571 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC3P19447 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC3P19447 AL512605.1-202ENST00000441919 381 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AL359955.2-201ENST00000445380 353 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 ELOCP30-201ENST00000447108 299 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AC108463.1-201ENST00000450258 347 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AC074386.1-201ENST00000476560 767 ntBASIC7.04□□□□□ -1.28
ERCC3P19447 AC092865.4-201ENST00000477936 615 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms