Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 AL359837.1-201ENST00000381357 287 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 RNA5SP246-201ENST00000458909 119 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 RN7SL812P-201ENST00000493791 279 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AC010374.1-201ENST00000503762 1237 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC025884.1-201ENST00000556034 378 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC008785.1-201ENST00000624475 456 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.97□□□□□ -1.61
COL11A1P12107 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.97□□□□□ -1.61
COL11A1P12107 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC104260.2-201ENST00000623551 3497 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.97□□□□□ -1.61
COL11A1P12107 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL11A1P12107 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
COL11A1P12107 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL11A1P12107 RNU1-132P-201ENST00000364300 164 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 OR2AH1P-201ENST00000425717 928 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 RRM2P4-201ENST00000441721 562 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.97□□□□□ -1.61
COL11A1P12107 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC108751.2-201ENST00000469993 231 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 HMGB3P16-201ENST00000508037 287 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.97□□□□□ -1.61
COL11A1P12107 AC009852.2-201ENST00000567898 485 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 AC245389.1-201ENST00000605141 529 ntBASIC4.97□□□□□ -1.61
COL11A1P12107 MAPK10-372ENST00000641954 3413 ntBASIC4.96□□□□□ -1.61
COL11A1P12107 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
COL11A1P12107 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
COL11A1P12107 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.96□□□□□ -1.61
COL11A1P12107 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.96□□□□□ -1.61
COL11A1P12107 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.96□□□□□ -1.62
COL11A1P12107 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 PEX12P1-201ENST00000400284 1048 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 PPIAP31-201ENST00000405422 495 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 LINC01881-201ENST00000416103 412 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.96□□□□□ -1.62
COL11A1P12107 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
COL11A1P12107 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.96□□□□□ -1.62
COL11A1P12107 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.96□□□□□ -1.62
COL11A1P12107 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.96□□□□□ -1.62
COL11A1P12107 AC087499.8-201ENST00000578406 226 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.96□□□□□ -1.62
COL11A1P12107 AC023043.4-201ENST00000612081 449 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
COL11A1P12107 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 AP001157.1-201ENST00000550837 2339 ntBASIC4.96□□□□□ -1.62
COL11A1P12107 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.96□□□□□ -1.62
COL11A1P12107 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL11A1P12107 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL11A1P12107 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL11A1P12107 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 SNORA48.7-201ENST00000391302 135 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AL592291.1-201ENST00000403830 352 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AL358176.3-201ENST00000420757 454 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
COL11A1P12107 CDY14P-201ENST00000431260 1014 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.95□□□□□ -1.62
COL11A1P12107 CDY12P-201ENST00000440679 1015 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 CDY13P-201ENST00000445813 1015 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 CDY23P-201ENST00000451661 1014 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AC108064.1-201ENST00000513791 460 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.95□□□□□ -1.62
COL11A1P12107 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.95□□□□□ -1.62
COL11A1P12107 BNIP3P33-201ENST00000598912 569 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 COX6CP4-201ENST00000605798 228 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 THAP12P5-201ENST00000405864 2275 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.95□□□□□ -1.62
COL11A1P12107 AC010266.2-201ENST00000564741 3255 ntBASIC4.95□□□□□ -1.62
COL11A1P12107 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL11A1P12107 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
COL11A1P12107 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL11A1P12107 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.95□□□□□ -1.62
COL11A1P12107 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.95□□□□□ -1.62
COL11A1P12107 MT-RNR1-201ENST00000389680 954 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms