Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 RN7SL41P-201ENST00000476144 297 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 OR11I1P-201ENST00000486033 954 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 GTF2IP9-201ENST00000502460 301 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 NIFKP7-201ENST00000503365 834 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 RNA5SP464-201ENST00000516251 108 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AC020937.1-201ENST00000519677 1013 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXC6P09630 AC105129.1-201ENST00000560250 297 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AC090286.3-201ENST00000573133 187 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AC027216.1-201ENST00000577726 685 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 MIR3160-1-201ENST00000577972 85 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AL450270.1-201ENST00000606160 391 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 AL355802.4-201ENST00000607635 548 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 OR4G3P-201ENST00000633500 913 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC6P09630 OR6C71P-202ENST00000641886 1107 ntBASIC5.45□□□□□ -1.54
HOXC6P09630 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC6P09630 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC6P09630 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 CCT8P1-201ENST00000413611 1657 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC6P09630 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 RNU6-618P-201ENST00000363518 112 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC6P09630 SNORA5.1-201ENST00000384275 131 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.44□□□□□ -1.54
HOXC6P09630 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 AL035405.1-201ENST00000400795 710 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 UQCRFS1P3-201ENST00000407697 385 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.44□□□□□ -1.54
HOXC6P09630 OR51A6P-201ENST00000418680 1004 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 MTND2P2-201ENST00000434633 945 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 Z80107.1-201ENST00000436830 412 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC6P09630 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC6P09630 AC108751.3-201ENST00000461814 1020 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC073073.1-201ENST00000493920 463 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 UBE2V1P12-201ENST00000503954 474 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 ENPP7P11-201ENST00000505915 627 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC093815.1-201ENST00000508637 280 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC091868.1-201ENST00000508746 304 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC026782.2-201ENST00000510845 636 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC034244.2-201ENST00000514668 858 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC112198.4-201ENST00000515450 351 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC134698.5-201ENST00000519444 336 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC6P09630 AC113192.3-201ENST00000529152 742 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC6P09630 AL513548.1-201ENST00000562904 1724 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.44□□□□□ -1.54
HOXC6P09630 AC008782.1-201ENST00000603386 430 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AC100847.1-201ENST00000611316 481 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 AL031658.2-201ENST00000616850 651 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXC6P09630 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXC6P09630 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXC6P09630 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
HOXC6P09630 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HOXC6P09630 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HOXC6P09630 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HOXC6P09630 AC009951.1-201ENST00000623674 2614 ntBASIC5.44□□□□□ -1.54
HOXC6P09630 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 AP000756.2-201ENST00000624168 2567 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 SNORA27.3-201ENST00000364937 134 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HOXC6P09630 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 CCNB2P1-201ENST00000399411 1150 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC069282.1-201ENST00000411911 526 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 AC009506.2-201ENST00000420635 840 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AC012519.1-201ENST00000424588 610 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXC6P09630 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 AC010618.1-201ENST00000469924 477 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXC6P09630 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC6P09630 RN7SL558P-201ENST00000497468 299 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.43□□□□□ -1.54
HOXC6P09630 AC093840.1-201ENST00000511599 336 ntBASIC5.43□□□□□ -1.54
HOXC6P09630 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXC6P09630 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms