Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC106806.2-201ENST00000509365 500 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.32□□□□□ -1.56
RB1P06400 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.32□□□□□ -1.56
RB1P06400 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 HIGD1AP18-201ENST00000520730 278 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC018442.3-201ENST00000523025 183 ntBASIC5.32□□□□□ -1.56
RB1P06400 HAUS1P3-201ENST00000523909 662 ntBASIC5.32□□□□□ -1.56
RB1P06400 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.32□□□□□ -1.56
RB1P06400 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.32□□□□□ -1.56
RB1P06400 OSBPL9P3-201ENST00000534523 595 ntBASIC5.32□□□□□ -1.56
RB1P06400 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 AC009852.2-201ENST00000567898 485 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 AC098483.2-201ENST00000603158 454 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC098935.2-201ENST00000604222 466 ntBASIC5.32□□□□□ -1.56
RB1P06400 AC084824.5-201ENST00000612009 413 ntBASIC5.32□□□□□ -1.56
RB1P06400 AL162574.1-201ENST00000615702 950 ntBASIC5.32□□□□□ -1.56
RB1P06400 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 AC119674.1-212ENST00000641155 993 ntBASIC5.32□□□□□ -1.56
RB1P06400 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.32□□□□□ -1.56
RB1P06400 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RB1P06400 AC007382.1-201ENST00000624376 2618 ntBASIC5.32□□□□□ -1.56
RB1P06400 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.32□□□□□ -1.56
RB1P06400 ZNF90P1-201ENST00000480493 1951 ntBASIC5.31□□□□□ -1.56
RB1P06400 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.31□□□□□ -1.56
RB1P06400 AC022893.2-201ENST00000564832 3296 ntBASIC5.31□□□□□ -1.56
RB1P06400 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 RNU6-650P-201ENST00000365658 111 ntBASIC5.31□□□□□ -1.56
RB1P06400 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 SNORA70F-201ENST00000384142 135 ntBASIC5.31□□□□□ -1.56
RB1P06400 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RB1P06400 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RB1P06400 AL049693.1-201ENST00000402760 611 ntBASIC5.31□□□□□ -1.56
RB1P06400 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.31□□□□□ -1.56
RB1P06400 AL359265.1-201ENST00000440296 795 ntBASIC5.31□□□□□ -1.56
RB1P06400 RPS29P9-201ENST00000440360 171 ntBASIC5.31□□□□□ -1.56
RB1P06400 MTCYBP21-201ENST00000443300 1113 ntBASIC5.31□□□□□ -1.56
RB1P06400 MED28P3-201ENST00000444288 531 ntBASIC5.31□□□□□ -1.56
RB1P06400 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 HMGB1P5-202ENST00000451497 985 ntBASIC5.31□□□□□ -1.56
RB1P06400 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.31□□□□□ -1.56
RB1P06400 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.31□□□□□ -1.56
RB1P06400 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 MIR4277-201ENST00000578298 84 ntBASIC5.31□□□□□ -1.56
RB1P06400 MIR4715-201ENST00000584117 79 ntBASIC5.31□□□□□ -1.56
RB1P06400 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.31□□□□□ -1.56
RB1P06400 AC093765.1-201ENST00000603758 881 ntBASIC5.31□□□□□ -1.56
RB1P06400 BNIP3P35-201ENST00000604530 490 ntBASIC5.31□□□□□ -1.56
RB1P06400 AL590392.1-201ENST00000604960 446 ntBASIC5.31□□□□□ -1.56
RB1P06400 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.31□□□□□ -1.56
RB1P06400 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 MIR6853-201ENST00000619642 74 ntBASIC5.31□□□□□ -1.56
RB1P06400 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.31□□□□□ -1.56
RB1P06400 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RB1P06400 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
RB1P06400 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RB1P06400 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.3□□□□□ -1.56
RB1P06400 RNU6-792P-201ENST00000363490 107 ntBASIC5.3□□□□□ -1.56
RB1P06400 RNA5SP223-201ENST00000365174 120 ntBASIC5.3□□□□□ -1.56
RB1P06400 RNU6-609P-201ENST00000365459 107 ntBASIC5.3□□□□□ -1.56
RB1P06400 SNORA48.4-201ENST00000391089 134 ntBASIC5.3□□□□□ -1.56
RB1P06400 RNU4-74P-201ENST00000411280 161 ntBASIC5.3□□□□□ -1.56
RB1P06400 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.3□□□□□ -1.56
RB1P06400 AC114755.2-201ENST00000413520 361 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms