Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-248P-201ENST00000410720 107 ntBASIC6.67□□□□□ -1.34
SOX1O00570 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 AL590806.1-201ENST00000415818 853 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AL121878.1-201ENST00000418638 859 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 AC245884.2-201ENST00000426257 404 ntBASIC6.67□□□□□ -1.34
SOX1O00570 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.67□□□□□ -1.34
SOX1O00570 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 CEACAMP9-201ENST00000442990 513 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.67□□□□□ -1.34
SOX1O00570 RPS23P9-201ENST00000448848 438 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 RPL23AP64-201ENST00000469465 435 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AC007686.1-201ENST00000488511 463 ntBASIC6.67□□□□□ -1.34
SOX1O00570 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 RNU6-1004P-201ENST00000516584 111 ntBASIC6.67□□□□□ -1.34
SOX1O00570 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.67□□□□□ -1.34
SOX1O00570 CENPUP1-201ENST00000526649 1202 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AC087276.1-201ENST00000529659 480 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AP001804.2-201ENST00000533932 910 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.67□□□□□ -1.34
SOX1O00570 OR1F2P-201ENST00000570470 933 ntBASIC6.67□□□□□ -1.34
SOX1O00570 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.67□□□□□ -1.34
SOX1O00570 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.67□□□□□ -1.34
SOX1O00570 AC008752.3-201ENST00000588113 712 ntBASIC6.67□□□□□ -1.34
SOX1O00570 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.67□□□□□ -1.34
SOX1O00570 AL512329.2-201ENST00000607350 548 ntBASIC6.67□□□□□ -1.34
SOX1O00570 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.67□□□□□ -1.34
SOX1O00570 AP000648.2-201ENST00000624182 404 ntBASIC6.67□□□□□ -1.34
SOX1O00570 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.67□□□□□ -1.34
SOX1O00570 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 AC137056.2-201ENST00000624055 1958 ntBASIC6.67□□□□□ -1.34
SOX1O00570 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
SOX1O00570 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 AC022325.1-201ENST00000502748 2199 ntBASIC6.67□□□□□ -1.34
SOX1O00570 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SOX1O00570 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 AC100871.1-201ENST00000507871 1456 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AP002364.1-201ENST00000623330 3386 ntBASIC6.66□□□□□ -1.34
SOX1O00570 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
SOX1O00570 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.66□□□□□ -1.34
SOX1O00570 EPS15P1-202ENST00000459691 2071 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.66□□□□□ -1.34
SOX1O00570 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SOX1O00570 MIR1284-201ENST00000408337 120 ntBASIC6.66□□□□□ -1.34
SOX1O00570 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.66□□□□□ -1.34
SOX1O00570 AL596448.1-201ENST00000415024 392 ntBASIC6.66□□□□□ -1.34
SOX1O00570 USP9YP13-201ENST00000417797 480 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.66□□□□□ -1.34
SOX1O00570 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.66□□□□□ -1.34
SOX1O00570 CRYGGP-201ENST00000443337 145 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC013828.1-201ENST00000481845 158 ntBASIC6.66□□□□□ -1.34
SOX1O00570 RPSAP50-201ENST00000481955 852 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AC024558.1-201ENST00000505008 528 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC024589.1-201ENST00000512207 263 ntBASIC6.66□□□□□ -1.34
SOX1O00570 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.66□□□□□ -1.34
SOX1O00570 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.66□□□□□ -1.34
SOX1O00570 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.66□□□□□ -1.34
SOX1O00570 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.66□□□□□ -1.34
SOX1O00570 AC063977.5-201ENST00000601044 974 ntBASIC6.66□□□□□ -1.34
SOX1O00570 SNORD91A-202ENST00000609620 191 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AC027807.2-201ENST00000616099 408 ntBASIC6.66□□□□□ -1.34
SOX1O00570 OR8G7P-201ENST00000616658 848 ntBASIC6.66□□□□□ -1.34
SOX1O00570 AP000346.3-201ENST00000622821 210 ntBASIC6.66□□□□□ -1.34
SOX1O00570 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SOX1O00570 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SOX1O00570 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SOX1O00570 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms