Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.78□□□□□ -1.8
SDCBPO00560 MIR4436B2-201ENST00000581415 91 ntBASIC3.78□□□□□ -1.8
SDCBPO00560 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.78□□□□□ -1.8
SDCBPO00560 MIR4436B1-201ENST00000583272 91 ntBASIC3.78□□□□□ -1.8
SDCBPO00560 MIR4737-201ENST00000583979 81 ntBASIC3.78□□□□□ -1.8
SDCBPO00560 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.78□□□□□ -1.8
SDCBPO00560 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.78□□□□□ -1.8
SDCBPO00560 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.78□□□□□ -1.8
SDCBPO00560 AC011503.2-201ENST00000594230 1500 ntBASIC3.78□□□□□ -1.8
SDCBPO00560 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SDCBPO00560 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SDCBPO00560 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.78□□□□□ -1.8
SDCBPO00560 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SDCBPO00560 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
SDCBPO00560 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.77□□□□□ -1.81
SDCBPO00560 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SDCBPO00560 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.77□□□□□ -1.81
SDCBPO00560 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SDCBPO00560 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SDCBPO00560 LAP3P1-201ENST00000403648 294 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.77□□□□□ -1.81
SDCBPO00560 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 AC062016.2-201ENST00000420950 676 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 RPS12P10-201ENST00000427031 377 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.77□□□□□ -1.81
SDCBPO00560 RPL12P3-201ENST00000440080 396 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 SCARNA10-201ENST00000459255 330 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 AC006967.1-201ENST00000467608 589 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.77□□□□□ -1.81
SDCBPO00560 AC015795.1-201ENST00000513669 327 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.77□□□□□ -1.81
SDCBPO00560 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.77□□□□□ -1.81
SDCBPO00560 AL133338.2-201ENST00000604292 736 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.77□□□□□ -1.81
SDCBPO00560 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
SDCBPO00560 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SDCBPO00560 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
SDCBPO00560 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 THAP12P8-201ENST00000447914 2115 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.76□□□□□ -1.81
SDCBPO00560 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 RPS26P13-201ENST00000419030 330 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.76□□□□□ -1.81
SDCBPO00560 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.76□□□□□ -1.81
SDCBPO00560 DDX39BP2-208ENST00000453923 258 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC079804.1-201ENST00000461922 436 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC092324.1-201ENST00000468671 324 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC083982.1-201ENST00000485679 344 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 NIP7P2-201ENST00000485801 544 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC011005.3-201ENST00000491624 395 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 MTND4LP2-201ENST00000502312 285 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC007016.1-201ENST00000512110 244 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 RNA5SP154-201ENST00000516193 111 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC105129.1-201ENST00000560250 297 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.76□□□□□ -1.81
SDCBPO00560 CYP4A43P-201ENST00000568156 121 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.76□□□□□ -1.81
SDCBPO00560 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDCBPO00560 AP002884.5-201ENST00000595053 1132 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 BNIP3P32-201ENST00000600015 554 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 Z98200.1-201ENST00000607298 470 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC015813.4-201ENST00000610469 179 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC007546.2-201ENST00000623996 360 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 AC010928.1-201ENST00000592477 1447 ntBASIC3.76□□□□□ -1.81
SDCBPO00560 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SDCBPO00560 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms