Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 HDGFP1-201ENST00000405943 252 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AL034374.1-201ENST00000406329 351 ntBASIC3.7□□□□□ -1.82
UPK2O00526 SNORA11.3-201ENST00000408471 128 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC140479.3-201ENST00000418944 1126 ntBASIC3.7□□□□□ -1.82
UPK2O00526 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 AL935212.3-201ENST00000450729 284 ntBASIC3.7□□□□□ -1.82
UPK2O00526 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 ISCUP1-201ENST00000454451 448 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC022795.1-201ENST00000473808 480 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC117394.1-201ENST00000477323 567 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC012158.1-204ENST00000483430 465 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC004815.1-201ENST00000484185 331 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK2O00526 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK2O00526 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.7□□□□□ -1.82
UPK2O00526 AC087888.1-201ENST00000550884 1254 ntBASIC3.7□□□□□ -1.82
UPK2O00526 HMGN2P6-201ENST00000551091 273 ntBASIC3.7□□□□□ -1.82
UPK2O00526 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK2O00526 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.7□□□□□ -1.82
UPK2O00526 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK2O00526 BGLT3-201ENST00000564523 994 ntBASIC3.7□□□□□ -1.82
UPK2O00526 FAM60CP-201ENST00000591086 664 ntBASIC3.7□□□□□ -1.82
UPK2O00526 SNORA11.6-201ENST00000619030 128 ntBASIC3.7□□□□□ -1.82
UPK2O00526 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPK2O00526 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK2O00526 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK2O00526 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.7□□□□□ -1.82
UPK2O00526 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
UPK2O00526 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK2O00526 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.7□□□□□ -1.82
UPK2O00526 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPK2O00526 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
UPK2O00526 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 Z95327.2-201ENST00000414579 1873 ntBASIC3.69□□□□□ -1.82
UPK2O00526 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
UPK2O00526 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 FCF1P5-201ENST00000406490 482 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RSU1P3-201ENST00000412878 835 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RPL23AP27-201ENST00000415161 451 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AL590806.1-201ENST00000415818 853 ntBASIC3.69□□□□□ -1.82
UPK2O00526 GTF3AP1-201ENST00000416942 1004 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC007064.3-201ENST00000422608 359 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RPL23AP25-201ENST00000430973 463 ntBASIC3.69□□□□□ -1.82
UPK2O00526 GEMIN8P3-201ENST00000445417 720 ntBASIC3.69□□□□□ -1.82
UPK2O00526 SUMO2P1-206ENST00000445436 284 ntBASIC3.69□□□□□ -1.82
UPK2O00526 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 RPL7L1P1-201ENST00000448259 785 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC108463.1-201ENST00000450258 347 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AL645937.3-201ENST00000453647 936 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RPL31P53-201ENST00000457065 348 ntBASIC3.69□□□□□ -1.82
UPK2O00526 RPL36AP41-201ENST00000493820 306 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AP000926.3-201ENST00000497201 299 ntBASIC3.69□□□□□ -1.82
UPK2O00526 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 RNU6-319P-201ENST00000516025 108 ntBASIC3.69□□□□□ -1.82
UPK2O00526 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.69□□□□□ -1.82
UPK2O00526 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK2O00526 AP001880.2-201ENST00000538233 448 ntBASIC3.69□□□□□ -1.82
UPK2O00526 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 EDDM3DP-201ENST00000554692 434 ntBASIC3.69□□□□□ -1.82
UPK2O00526 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.69□□□□□ -1.82
UPK2O00526 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK2O00526 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.69□□□□□ -1.82
UPK2O00526 ADAD1P2-201ENST00000588476 646 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC023762.1-201ENST00000603280 584 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC034236.3-201ENST00000605999 461 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC117490.2-201ENST00000610042 594 ntBASIC3.69□□□□□ -1.82
UPK2O00526 MIR6886-201ENST00000619864 61 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC091905.2-201ENST00000623143 306 ntBASIC3.69□□□□□ -1.82
UPK2O00526 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPK2O00526 AC009313.2-201ENST00000417893 1941 ntBASIC3.69□□□□□ -1.82
UPK2O00526 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
UPK2O00526 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.69□□□□□ -1.82
UPK2O00526 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.69□□□□□ -1.82
UPK2O00526 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPK2O00526 AC006971.1-201ENST00000407916 4486 ntBASIC3.68□□□□□ -1.82
UPK2O00526 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms