Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 XKRYP4-201ENST00000414395 483 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC008072.1-201ENST00000434254 824 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AL137845.2-201ENST00000444292 988 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC112498.1-201ENST00000444401 332 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC004980.3-201ENST00000447046 365 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 XKRYP5-201ENST00000449659 483 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 NPM1P39-201ENST00000449818 867 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 PRPF38AP1-201ENST00000451976 933 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RNU7-27P-201ENST00000459281 62 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RN7SL319P-201ENST00000480656 221 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC007686.1-201ENST00000488511 463 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC010350.1-201ENST00000504908 231 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RN7SKP141-201ENST00000516167 338 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RNU6-1004P-201ENST00000516584 111 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC021006.3-201ENST00000530771 192 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC027369.5-201ENST00000533838 755 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 CR383656.6-201ENST00000550518 394 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 SULT1C2P2-201ENST00000562517 294 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC022884.3-201ENST00000579571 248 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AL031320.1-201ENST00000604177 357 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 MEMO1P5-201ENST00000604810 406 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 AC097372.4-201ENST00000625025 466 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 FRG1EP-201ENST00000634469 770 ntBASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA3F8WFD2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 RNU6-225P-201ENST00000384613 103 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AP002530.1-201ENST00000405705 684 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 RNU2-17P-201ENST00000410290 190 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 TATDN1P1-201ENST00000414123 891 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 EIF2S2P3-201ENST00000428356 999 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 COX6CP13-201ENST00000428703 226 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 RPL7P48-201ENST00000461513 746 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC023424.1-201ENST00000496058 459 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC100784.1-201ENST00000522790 310 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 NPM1P47-201ENST00000560843 856 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL390726.5-202ENST00000564800 256 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC084824.5-201ENST00000612009 413 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC011472.4-201ENST00000615848 491 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AL121890.2-201ENST00000617644 465 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC097460.3-201ENST00000623099 442 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 AC106730.3-201ENST00000624568 641 ntBASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.57□□□□□ -1.68
NPIPA3F8WFD2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms