Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SDCBPP3-201ENST00000419629 891 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 FABP7P1-201ENST00000424004 391 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CYP4F34P-201ENST00000425951 481 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC134879.1-201ENST00000426062 394 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 FCF1P1-201ENST00000432690 571 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC002486.1-201ENST00000435098 391 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC019185.3-201ENST00000438805 323 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC079448.1-201ENST00000449377 373 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC005517.1-201ENST00000452091 489 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC004692.1-201ENST00000455430 424 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 OR7E7P-201ENST00000455678 1012 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RPL38P1-201ENST00000460914 211 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 MTCO3P9-201ENST00000506989 781 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AP003080.1-202ENST00000526526 915 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 FRG2IP-201ENST00000563581 781 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC002519.2-203ENST00000567043 837 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 MIR544B-201ENST00000582372 78 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL133338.2-201ENST00000604292 736 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AL080312.2-201ENST00000613001 630 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 PART1_3.1-201ENST00000619680 131 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC087893.2-201ENST00000623272 255 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC021106.3-201ENST00000623925 531 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CDRT1-208ENST00000630868 794 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC006026.1-201ENST00000444025 1803 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 AC105235.1-201ENST00000623208 1816 ntBASIC5.73□□□□□ -1.49
SHISA3A0PJX4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.73□□□□□ -1.49
SHISA3A0PJX4 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 ZNF402P-201ENST00000404435 3100 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RNU4-73P-201ENST00000363164 141 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SNORD56.2-201ENST00000363242 71 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RNY4P34-201ENST00000364779 95 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RNU1-59P-201ENST00000364829 162 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SNRPEP2-201ENST00000397592 279 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 PEX12P1-201ENST00000400284 1048 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AMD1P2-201ENST00000412936 992 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RPS21P8-201ENST00000413365 247 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 HMGB3P20-201ENST00000417997 600 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SNRPEP10-201ENST00000420249 274 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 COX6CP17-201ENST00000421389 185 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC008850.1-201ENST00000427546 362 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 NPM1P34-201ENST00000428821 893 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL590128.1-201ENST00000433407 286 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 MYL6P3-201ENST00000436904 432 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 MTCO1P27-201ENST00000448269 226 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 Z82190.1-201ENST00000454534 490 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 C1DP4-201ENST00000455429 424 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AL355032.1-201ENST00000472981 438 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC005017.1-201ENST00000482002 490 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC007182.2-201ENST00000489251 402 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RPL19P11-201ENST00000495944 589 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AC093325.1-201ENST00000508378 326 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 SNX18P23-201ENST00000510867 677 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RNU6-150P-201ENST00000516237 95 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 RNA5SP278-201ENST00000517055 102 ntBASIC5.72□□□□□ -1.49
SHISA3A0PJX4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms