Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 CROCCP3-202ENST00000420820 1947 ntBASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHA3Q9Y5H8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 AL049812.1-201ENST00000432563 2267 ntBASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHA3Q9Y5H8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 GUSBP6-202ENST00000438529 1198 ntBASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 AL138781.2-201ENST00000617896 1843 ntBASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PCDHA3Q9Y5H8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 AC006970.2-201ENST00000450065 779 ntBASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 NEFHP1-201ENST00000412845 2629 ntBASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHA3Q9Y5H8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 AC104417.2-201ENST00000562989 1793 ntBASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PCDHA3Q9Y5H8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms