Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM62Q9BVG3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 KRT16P1-201ENST00000399124 1418 ntBASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM62Q9BVG3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 RPS2P4-201ENST00000476944 856 ntBASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 AC131212.4-201ENST00000623606 975 ntBASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 AL049637.2-201ENST00000641778 930 ntBASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM62Q9BVG3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 TREX1-205ENST00000625293 1783 ntBASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 HLA-A-209ENST00000638375 975 ntBASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM62Q9BVG3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM62Q9BVG3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms