Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 FAM99A-202ENST00000538190 1989 ntBASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 ZNF259P1-201ENST00000407656 1365 ntBASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AC243591.1-201ENST00000452967 1364 ntBASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AC074051.2-201ENST00000565115 352 ntBASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 AC011484.1-201ENST00000377652 1995 ntBASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.5■□□□□ 0.71
LRFN3Q9BTN0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 HLA-J-202ENST00000469281 1241 ntBASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 SART3-203ENST00000546611 1184 ntBASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 AC010327.4-202ENST00000591484 748 ntBASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRFN3Q9BTN0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 RPSAP43-201ENST00000402237 625 ntBASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 AC099336.1-202ENST00000602961 463 ntBASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 KRT8P17-201ENST00000453110 1448 ntBASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRFN3Q9BTN0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 AC009065.1-201ENST00000564055 1225 ntBASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 AC092364.2-202ENST00000597012 1073 ntBASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 AC112497.1-201ENST00000624824 639 ntBASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRFN3Q9BTN0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 KRT18P67-201ENST00000432816 1264 ntBASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.46■□□□□ 0.71
LRFN3Q9BTN0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms