Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 AC133041.1-202ENST00000642053 222 ntBASIC14.38□□□□□ -0.11
ODF3Q96PU9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.38□□□□□ -0.11
ODF3Q96PU9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.38□□□□□ -0.11
ODF3Q96PU9 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ODF3Q96PU9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 AC141586.3-201ENST00000562166 1838 ntBASIC14.37□□□□□ -0.11
ODF3Q96PU9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 KRT18P16-201ENST00000510337 1294 ntBASIC14.37□□□□□ -0.11
ODF3Q96PU9 AC120498.8-201ENST00000614275 531 ntBASIC14.37□□□□□ -0.11
ODF3Q96PU9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 TNXA-203ENST00000507684 2038 ntBASIC14.37□□□□□ -0.11
ODF3Q96PU9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ODF3Q96PU9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ODF3Q96PU9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.36□□□□□ -0.11
ODF3Q96PU9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 AC083880.1-201ENST00000608266 535 ntBASIC14.36□□□□□ -0.11
ODF3Q96PU9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.36□□□□□ -0.11
ODF3Q96PU9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ODF3Q96PU9 AC026471.1-201ENST00000564629 3026 ntBASIC14.36□□□□□ -0.11
ODF3Q96PU9 AP000974.1-201ENST00000623909 2387 ntBASIC14.36□□□□□ -0.11
ODF3Q96PU9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 AC069152.1-201ENST00000438030 544 ntBASIC14.35□□□□□ -0.11
ODF3Q96PU9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 AC124283.5-201ENST00000624661 1809 ntBASIC14.35□□□□□ -0.11
ODF3Q96PU9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ODF3Q96PU9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ODF3Q96PU9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms