Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
USP48Q86UV5 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
USP48Q86UV5 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
USP48Q86UV5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
USP48Q86UV5 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.84■■□□□ 1.41
USP48Q86UV5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.84■■□□□ 1.41
USP48Q86UV5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.84■■□□□ 1.41
USP48Q86UV5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 AC099778.1-201ENST00000568593 1911 ntBASIC23.84■■□□□ 1.41
USP48Q86UV5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.84■■□□□ 1.41
USP48Q86UV5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
USP48Q86UV5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
USP48Q86UV5 AC011484.1-201ENST00000377652 1995 ntBASIC23.83■■□□□ 1.41
USP48Q86UV5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.83■■□□□ 1.41
USP48Q86UV5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
USP48Q86UV5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
USP48Q86UV5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
USP48Q86UV5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 AK4P3-201ENST00000418260 669 ntBASIC23.83■■□□□ 1.41
USP48Q86UV5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.83■■□□□ 1.41
USP48Q86UV5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
USP48Q86UV5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.83■■□□□ 1.41
USP48Q86UV5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
USP48Q86UV5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP48Q86UV5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP48Q86UV5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
USP48Q86UV5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
USP48Q86UV5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.83■■□□□ 1.4
USP48Q86UV5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.82■■□□□ 1.4
USP48Q86UV5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.82■■□□□ 1.4
USP48Q86UV5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.82■■□□□ 1.4
USP48Q86UV5 C2orf69P3-201ENST00000565542 1120 ntBASIC23.82■■□□□ 1.4
USP48Q86UV5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 AC091076.1-201ENST00000610741 619 ntBASIC23.82■■□□□ 1.4
USP48Q86UV5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.82■■□□□ 1.4
USP48Q86UV5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.82■■□□□ 1.4
USP48Q86UV5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.82■■□□□ 1.4
USP48Q86UV5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
USP48Q86UV5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.81■■□□□ 1.4
USP48Q86UV5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
USP48Q86UV5 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.81■■□□□ 1.4
USP48Q86UV5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
USP48Q86UV5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.81■■□□□ 1.4
USP48Q86UV5 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.81■■□□□ 1.4
USP48Q86UV5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.81■■□□□ 1.4
USP48Q86UV5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC23.81■■□□□ 1.4
USP48Q86UV5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.81■■□□□ 1.4
USP48Q86UV5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.81■■□□□ 1.4
USP48Q86UV5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
USP48Q86UV5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms