Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 AL512604.3-201ENST00000569583 964 ntBASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 AL512408.1-201ENST00000569378 2000 ntBASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 AC009078.2-202ENST00000463353 338 ntBASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
VPS13BQ7Z7G8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 HOMER2P1-201ENST00000455653 964 ntBASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 EMBP1-201ENST00000458200 901 ntBASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 BCL10-202ENST00000620248 774 ntTSL 5 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC012313.10-201ENST00000623509 926 ntBASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 FEM1AP1-201ENST00000431297 1995 ntBASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VPS13BQ7Z7G8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 GCSHP2-201ENST00000560971 527 ntBASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 CKBP1-201ENST00000565489 1086 ntBASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 AL691432.2-201ENST00000607222 2038 ntBASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 AC006538.3-201ENST00000612495 578 ntBASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13BQ7Z7G8 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VPS13BQ7Z7G8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms