Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 AC079781.3-201ENST00000449110 356 ntBASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTCRAQ6ISU1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 TSPY19P-201ENST00000418461 509 ntBASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 TSPY18P-201ENST00000441642 509 ntBASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.1■□□□□ 0.81
PTCRAQ6ISU1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 RASA4DP-201ENST00000460726 1199 ntBASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 LINC01711-201ENST00000598340 967 ntBASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTCRAQ6ISU1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 AC091304.2-201ENST00000564639 760 ntBASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.08■□□□□ 0.81
PTCRAQ6ISU1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCRAQ6ISU1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTCRAQ6ISU1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 AC034232.1-201ENST00000506026 1064 ntBASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 AL121772.3-201ENST00000610840 674 ntBASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTCRAQ6ISU1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 KRT18P1-202ENST00000452408 1331 ntBASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 AC106795.1-205ENST00000512851 1056 ntBASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 SLC25A6P4-201ENST00000586535 553 ntBASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 AL049796.1-201ENST00000565336 1766 ntBASIC20.06■□□□□ 0.8
PTCRAQ6ISU1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.05■□□□□ 0.8
PTCRAQ6ISU1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms