Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC010331.1-201ENST00000611423 582 ntBASIC23.39■■□□□ 1.34
PDS5AQ29RF7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
PDS5AQ29RF7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDS5AQ29RF7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 AL023803.3-201ENST00000615559 522 ntBASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.38■■□□□ 1.33
PDS5AQ29RF7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 AL157384.1-201ENST00000445995 2473 ntBASIC23.37■■□□□ 1.33
PDS5AQ29RF7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PDS5AQ29RF7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 PRSS44-201ENST00000515154 1146 ntBASIC23.36■■□□□ 1.33
PDS5AQ29RF7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 AC010653.2-201ENST00000623505 997 ntBASIC23.36■■□□□ 1.33
PDS5AQ29RF7 AC104417.2-201ENST00000562989 1793 ntBASIC23.36■■□□□ 1.33
PDS5AQ29RF7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 AC092338.2-201ENST00000568827 1415 ntBASIC23.36■■□□□ 1.33
PDS5AQ29RF7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDS5AQ29RF7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 INGX-201ENST00000359239 846 ntBASIC23.35■■□□□ 1.33
PDS5AQ29RF7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 AL137013.1-201ENST00000432946 1228 ntBASIC23.35■■□□□ 1.33
PDS5AQ29RF7 CCR12P-201ENST00000446203 998 ntBASIC23.35■■□□□ 1.33
PDS5AQ29RF7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 AC116562.4-202ENST00000641738 218 ntBASIC23.35■■□□□ 1.33
PDS5AQ29RF7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PDS5AQ29RF7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDS5AQ29RF7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms