Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.52■□□□□ 0.56
GABREP78334 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.52■□□□□ 0.56
GABREP78334 AL359075.1-203ENST00000462729 1002 ntBASIC18.52■□□□□ 0.56
GABREP78334 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.52■□□□□ 0.56
GABREP78334 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.52■□□□□ 0.56
GABREP78334 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.52■□□□□ 0.56
GABREP78334 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.52■□□□□ 0.56
GABREP78334 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.52■□□□□ 0.56
GABREP78334 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.52■□□□□ 0.56
GABREP78334 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GABREP78334 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GABREP78334 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
GABREP78334 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GABREP78334 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
GABREP78334 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
GABREP78334 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
GABREP78334 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
GABREP78334 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
GABREP78334 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.51■□□□□ 0.55
GABREP78334 AL671277.2-201ENST00000458060 996 ntBASIC18.51■□□□□ 0.55
GABREP78334 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.51■□□□□ 0.55
GABREP78334 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.51■□□□□ 0.55
GABREP78334 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
GABREP78334 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GABREP78334 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GABREP78334 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GABREP78334 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.5■□□□□ 0.55
GABREP78334 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.5■□□□□ 0.55
GABREP78334 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.5■□□□□ 0.55
GABREP78334 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.5■□□□□ 0.55
GABREP78334 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.5■□□□□ 0.55
GABREP78334 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.5■□□□□ 0.55
GABREP78334 AC140113.3-201ENST00000605663 199 ntBASIC18.5■□□□□ 0.55
GABREP78334 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.5■□□□□ 0.55
GABREP78334 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.5■□□□□ 0.55
GABREP78334 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GABREP78334 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GABREP78334 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.5■□□□□ 0.55
GABREP78334 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.5■□□□□ 0.55
GABREP78334 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
GABREP78334 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
GABREP78334 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.49■□□□□ 0.55
GABREP78334 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
GABREP78334 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 DUSP5P1-201ENST00000441325 1139 ntBASIC18.49■□□□□ 0.55
GABREP78334 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.49■□□□□ 0.55
GABREP78334 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.49■□□□□ 0.55
GABREP78334 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.49■□□□□ 0.55
GABREP78334 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.49■□□□□ 0.55
GABREP78334 AL023803.3-201ENST00000615559 522 ntBASIC18.49■□□□□ 0.55
GABREP78334 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.49■□□□□ 0.55
GABREP78334 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GABREP78334 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
GABREP78334 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.49■□□□□ 0.55
GABREP78334 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GABREP78334 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.49■□□□□ 0.55
GABREP78334 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GABREP78334 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABREP78334 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABREP78334 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GABREP78334 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GABREP78334 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms