Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.91■□□□□ 0.62
PDX1P52945 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.91■□□□□ 0.62
PDX1P52945 B3GAT3P1-201ENST00000471720 806 ntBASIC18.91■□□□□ 0.62
PDX1P52945 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 AC010203.1-204ENST00000548782 407 ntBASIC18.91■□□□□ 0.62
PDX1P52945 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.91■□□□□ 0.62
PDX1P52945 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PDX1P52945 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PDX1P52945 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PDX1P52945 AL162377.1-201ENST00000618844 1793 ntBASIC18.91■□□□□ 0.62
PDX1P52945 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
PDX1P52945 FSCN1P1-201ENST00000568912 1481 ntBASIC18.9■□□□□ 0.62
PDX1P52945 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 TFP1-202ENST00000475455 1573 ntBASIC18.9■□□□□ 0.62
PDX1P52945 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.9■□□□□ 0.62
PDX1P52945 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.9■□□□□ 0.62
PDX1P52945 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.9■□□□□ 0.62
PDX1P52945 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 AP005242.2-201ENST00000580065 1175 ntBASIC18.9■□□□□ 0.62
PDX1P52945 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.9■□□□□ 0.62
PDX1P52945 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.9■□□□□ 0.62
PDX1P52945 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.9■□□□□ 0.62
PDX1P52945 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.9■□□□□ 0.62
PDX1P52945 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PDX1P52945 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PDX1P52945 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.89■□□□□ 0.62
PDX1P52945 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDX1P52945 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDX1P52945 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDX1P52945 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDX1P52945 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDX1P52945 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDX1P52945 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
PDX1P52945 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PDX1P52945 AC004980.1-204ENST00000429707 299 ntBASIC18.89■□□□□ 0.61
PDX1P52945 AC104076.2-201ENST00000448912 469 ntBASIC18.89■□□□□ 0.61
PDX1P52945 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.89■□□□□ 0.61
PDX1P52945 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDX1P52945 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.89■□□□□ 0.61
PDX1P52945 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.89■□□□□ 0.61
PDX1P52945 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
PDX1P52945 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDX1P52945 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDX1P52945 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.88■□□□□ 0.61
PDX1P52945 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.88■□□□□ 0.61
PDX1P52945 YBX1P10-201ENST00000444752 975 ntBASIC18.88■□□□□ 0.61
PDX1P52945 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.88■□□□□ 0.61
PDX1P52945 AC011506.1-201ENST00000474329 610 ntBASIC18.88■□□□□ 0.61
PDX1P52945 DUX4L26-201ENST00000489078 1255 ntBASIC18.88■□□□□ 0.61
PDX1P52945 KRT18P16-201ENST00000510337 1294 ntBASIC18.88■□□□□ 0.61
PDX1P52945 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.88■□□□□ 0.61
PDX1P52945 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.88■□□□□ 0.61
PDX1P52945 DGCR10-201ENST00000609839 495 ntBASIC18.88■□□□□ 0.61
PDX1P52945 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PDX1P52945 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.88■□□□□ 0.61
PDX1P52945 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PDX1P52945 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.88■□□□□ 0.61
PDX1P52945 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDX1P52945 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDX1P52945 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms