Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RFX1P22670 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX1P22670 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RFX1P22670 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.19■□□□□ 0.98
RFX1P22670 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX1P22670 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX1P22670 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX1P22670 TFP1-202ENST00000475455 1573 ntBASIC21.19■□□□□ 0.98
RFX1P22670 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX1P22670 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX1P22670 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RFX1P22670 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.18■□□□□ 0.98
RFX1P22670 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX1P22670 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.18■□□□□ 0.98
RFX1P22670 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.18■□□□□ 0.98
RFX1P22670 AC093484.2-201ENST00000580996 2166 ntBASIC21.18■□□□□ 0.98
RFX1P22670 AL135905.2-201ENST00000584934 1404 ntBASIC21.18■□□□□ 0.98
RFX1P22670 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX1P22670 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX1P22670 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
RFX1P22670 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX1P22670 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RFX1P22670 AC005332.7-201ENST00000614046 2005 ntBASIC21.17■□□□□ 0.98
RFX1P22670 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
RFX1P22670 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RFX1P22670 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RFX1P22670 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFX1P22670 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.17■□□□□ 0.98
RFX1P22670 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.17■□□□□ 0.98
RFX1P22670 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RFX1P22670 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX1P22670 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.17■□□□□ 0.98
RFX1P22670 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.17■□□□□ 0.98
RFX1P22670 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX1P22670 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFX1P22670 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFX1P22670 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX1P22670 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX1P22670 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX1P22670 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX1P22670 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX1P22670 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX1P22670 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX1P22670 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.16■□□□□ 0.98
RFX1P22670 AL049637.2-201ENST00000641778 930 ntBASIC21.16■□□□□ 0.98
RFX1P22670 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX1P22670 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RFX1P22670 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RFX1P22670 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
RFX1P22670 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
RFX1P22670 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.15■□□□□ 0.98
RFX1P22670 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RFX1P22670 AL023875.1-201ENST00000640777 796 ntBASIC21.15■□□□□ 0.98
RFX1P22670 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.15■□□□□ 0.98
RFX1P22670 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RFX1P22670 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX1P22670 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms