Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SRPRAP08240 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.68■□□□□ 0.74
SRPRAP08240 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.68■□□□□ 0.74
SRPRAP08240 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.68■□□□□ 0.74
SRPRAP08240 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.68■□□□□ 0.74
SRPRAP08240 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.68■□□□□ 0.74
SRPRAP08240 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.68■□□□□ 0.74
SRPRAP08240 AC010947.1-201ENST00000623454 693 ntBASIC19.68■□□□□ 0.74
SRPRAP08240 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SRPRAP08240 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 LINC01568-207ENST00000641790 1380 ntBASIC19.68■□□□□ 0.74
SRPRAP08240 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.68■□□□□ 0.74
SRPRAP08240 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SRPRAP08240 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.68■□□□□ 0.74
SRPRAP08240 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SRPRAP08240 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SRPRAP08240 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SRPRAP08240 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 CRYGFP-201ENST00000418459 633 ntBASIC19.67■□□□□ 0.74
SRPRAP08240 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 AC008040.2-201ENST00000461049 708 ntBASIC19.67■□□□□ 0.74
SRPRAP08240 AC091390.4-202ENST00000476426 537 ntBASIC19.67■□□□□ 0.74
SRPRAP08240 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
SRPRAP08240 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.67■□□□□ 0.74
SRPRAP08240 C2orf69P3-201ENST00000565542 1120 ntBASIC19.67■□□□□ 0.74
SRPRAP08240 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRPRAP08240 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.67■□□□□ 0.74
SRPRAP08240 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
SRPRAP08240 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.66■□□□□ 0.74
SRPRAP08240 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.66■□□□□ 0.74
SRPRAP08240 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 SLC25A1P4-201ENST00000567977 778 ntBASIC19.66■□□□□ 0.74
SRPRAP08240 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 KRT18P22-201ENST00000402024 1347 ntBASIC19.66■□□□□ 0.74
SRPRAP08240 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 AL157384.1-201ENST00000445995 2473 ntBASIC19.66■□□□□ 0.74
SRPRAP08240 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.66■□□□□ 0.74
SRPRAP08240 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.66■□□□□ 0.74
SRPRAP08240 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRPRAP08240 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.66■□□□□ 0.74
SRPRAP08240 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.66■□□□□ 0.74
SRPRAP08240 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
SRPRAP08240 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.65■□□□□ 0.74
SRPRAP08240 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SRPRAP08240 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.65■□□□□ 0.74
SRPRAP08240 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.65■□□□□ 0.74
SRPRAP08240 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.65■□□□□ 0.74
SRPRAP08240 AC096733.2-201ENST00000609937 1394 ntBASIC19.65■□□□□ 0.74
SRPRAP08240 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SRPRAP08240 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SRPRAP08240 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.65■□□□□ 0.74
SRPRAP08240 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRPRAP08240 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRPRAP08240 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRPRAP08240 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.64■□□□□ 0.74
SRPRAP08240 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms