Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFBP01127 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
PDGFBP01127 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.62■□□□□ 0.73
PDGFBP01127 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFBP01127 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 NUS1P1-201ENST00000446295 882 ntBASIC19.62■□□□□ 0.73
PDGFBP01127 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFBP01127 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFBP01127 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFBP01127 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.62■□□□□ 0.73
PDGFBP01127 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 AL024507.2-201ENST00000606070 2574 ntBASIC19.62■□□□□ 0.73
PDGFBP01127 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.62■□□□□ 0.73
PDGFBP01127 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDGFBP01127 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.61■□□□□ 0.73
PDGFBP01127 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFBP01127 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFBP01127 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 SLC25A6P4-201ENST00000586535 553 ntBASIC19.61■□□□□ 0.73
PDGFBP01127 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.61■□□□□ 0.73
PDGFBP01127 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDGFBP01127 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.61■□□□□ 0.73
PDGFBP01127 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFBP01127 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFBP01127 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFBP01127 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFBP01127 TSPY19P-201ENST00000418461 509 ntBASIC19.6■□□□□ 0.73
PDGFBP01127 TSPY18P-201ENST00000441642 509 ntBASIC19.6■□□□□ 0.73
PDGFBP01127 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
PDGFBP01127 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFBP01127 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFBP01127 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PDGFBP01127 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PDGFBP01127 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFBP01127 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFBP01127 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFBP01127 AL049796.1-201ENST00000565336 1766 ntBASIC19.6■□□□□ 0.73
PDGFBP01127 KRT8P8-201ENST00000434750 1448 ntBASIC19.59■□□□□ 0.73
PDGFBP01127 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PDGFBP01127 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PDGFBP01127 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PDGFBP01127 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.59■□□□□ 0.73
PDGFBP01127 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.59■□□□□ 0.73
PDGFBP01127 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.59■□□□□ 0.73
PDGFBP01127 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFBP01127 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDGFBP01127 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 Z98882.1-201ENST00000622160 2253 ntBASIC19.59■□□□□ 0.73
PDGFBP01127 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 GUSBP5-202ENST00000510805 1989 ntBASIC19.59■□□□□ 0.73
PDGFBP01127 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFBP01127 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFBP01127 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.58■□□□□ 0.73
PDGFBP01127 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
PDGFBP01127 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.58■□□□□ 0.73
PDGFBP01127 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFBP01127 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFBP01127 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.58■□□□□ 0.73
PDGFBP01127 KRT8P41-201ENST00000533985 1514 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms