Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.13■□□□□ 0.97
TIMP1P01033 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.13■□□□□ 0.97
TIMP1P01033 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TIMP1P01033 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TIMP1P01033 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP1P01033 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP1P01033 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.12■□□□□ 0.97
TIMP1P01033 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP1P01033 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TIMP1P01033 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 AL845331.1-201ENST00000424978 1190 ntBASIC21.12■□□□□ 0.97
TIMP1P01033 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP1P01033 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP1P01033 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.12■□□□□ 0.97
TIMP1P01033 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TIMP1P01033 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP1P01033 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.11■□□□□ 0.97
TIMP1P01033 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 AC004870.1-201ENST00000315132 882 ntBASIC21.11■□□□□ 0.97
TIMP1P01033 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
TIMP1P01033 HBZP1-201ENST00000354915 429 ntBASIC21.11■□□□□ 0.97
TIMP1P01033 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 PVRIG2P-201ENST00000435460 978 ntBASIC21.11■□□□□ 0.97
TIMP1P01033 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 AC111152.3-201ENST00000569699 673 ntBASIC21.11■□□□□ 0.97
TIMP1P01033 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 CR769767.2-201ENST00000622735 460 ntBASIC21.11■□□□□ 0.97
TIMP1P01033 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP1P01033 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
TIMP1P01033 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TIMP1P01033 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.1■□□□□ 0.97
TIMP1P01033 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 AP000347.1-202ENST00000435868 847 ntBASIC21.1■□□□□ 0.97
TIMP1P01033 KRT17P6-201ENST00000453795 1220 ntBASIC21.1■□□□□ 0.97
TIMP1P01033 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.1■□□□□ 0.97
TIMP1P01033 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.1■□□□□ 0.97
TIMP1P01033 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.1■□□□□ 0.97
TIMP1P01033 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.1■□□□□ 0.97
TIMP1P01033 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP1P01033 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP1P01033 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.1■□□□□ 0.97
TIMP1P01033 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMP1P01033 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMP1P01033 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 AL645929.1-201ENST00000420084 975 ntBASIC21.09■□□□□ 0.97
TIMP1P01033 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
TIMP1P01033 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMP1P01033 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.09■□□□□ 0.97
TIMP1P01033 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP1P01033 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMP1P01033 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.08■□□□□ 0.97
TIMP1P01033 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.08■□□□□ 0.97
TIMP1P01033 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP1P01033 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.08■□□□□ 0.97
TIMP1P01033 FAAHP1-202ENST00000446499 1238 ntBASIC21.08■□□□□ 0.97
TIMP1P01033 KRT8P10-201ENST00000450021 1447 ntBASIC21.08■□□□□ 0.97
TIMP1P01033 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms