Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TOP3BO95985 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 AP000974.1-201ENST00000623909 2387 ntBASIC19.92■□□□□ 0.78
TOP3BO95985 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 KRT18P68-201ENST00000392293 1000 ntBASIC19.92■□□□□ 0.78
TOP3BO95985 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.92■□□□□ 0.78
TOP3BO95985 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TOP3BO95985 AC093484.2-201ENST00000580996 2166 ntBASIC19.92■□□□□ 0.78
TOP3BO95985 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TOP3BO95985 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TOP3BO95985 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 TMEM179-206ENST00000616017 1645 ntBASIC19.91■□□□□ 0.78
TOP3BO95985 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 AC239809.2-201ENST00000415381 517 ntBASIC19.91■□□□□ 0.78
TOP3BO95985 AC133681.1-201ENST00000465482 601 ntBASIC19.91■□□□□ 0.78
TOP3BO95985 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.91■□□□□ 0.78
TOP3BO95985 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.91■□□□□ 0.78
TOP3BO95985 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.91■□□□□ 0.78
TOP3BO95985 AC018445.3-201ENST00000624177 1945 ntBASIC19.91■□□□□ 0.78
TOP3BO95985 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.91■□□□□ 0.78
TOP3BO95985 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP3BO95985 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.91■□□□□ 0.78
TOP3BO95985 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TOP3BO95985 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.9■□□□□ 0.78
TOP3BO95985 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TOP3BO95985 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TOP3BO95985 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TOP3BO95985 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TOP3BO95985 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.9■□□□□ 0.78
TOP3BO95985 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.9■□□□□ 0.78
TOP3BO95985 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
TOP3BO95985 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
TOP3BO95985 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.89■□□□□ 0.77
TOP3BO95985 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TOP3BO95985 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TOP3BO95985 KRASP1-201ENST00000407852 552 ntBASIC19.89■□□□□ 0.77
TOP3BO95985 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.89■□□□□ 0.77
TOP3BO95985 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.89■□□□□ 0.77
TOP3BO95985 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TOP3BO95985 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TOP3BO95985 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.89■□□□□ 0.77
TOP3BO95985 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms