Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMAD6O43541 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMAD6O43541 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SMAD6O43541 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.71■□□□□ 0.75
SMAD6O43541 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.71■□□□□ 0.75
SMAD6O43541 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.71■□□□□ 0.75
SMAD6O43541 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.71■□□□□ 0.75
SMAD6O43541 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SMAD6O43541 AC079598.2-202ENST00000546624 1451 ntBASIC19.71■□□□□ 0.75
SMAD6O43541 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD6O43541 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.7■□□□□ 0.74
SMAD6O43541 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.7■□□□□ 0.74
SMAD6O43541 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.7■□□□□ 0.74
SMAD6O43541 MIR6786-201ENST00000616843 113 ntBASIC19.7■□□□□ 0.74
SMAD6O43541 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SMAD6O43541 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.7■□□□□ 0.74
SMAD6O43541 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
SMAD6O43541 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD6O43541 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD6O43541 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD6O43541 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 B3GAT3P1-201ENST00000471720 806 ntBASIC19.69■□□□□ 0.74
SMAD6O43541 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD6O43541 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 AC026271.3-201ENST00000571884 352 ntBASIC19.69■□□□□ 0.74
SMAD6O43541 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD6O43541 AP000525.1-201ENST00000608286 694 ntBASIC19.69■□□□□ 0.74
SMAD6O43541 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.69■□□□□ 0.74
SMAD6O43541 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SMAD6O43541 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD6O43541 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SMAD6O43541 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD6O43541 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD6O43541 AFG3L1P-217ENST00000557444 2447 ntBASIC19.68■□□□□ 0.74
SMAD6O43541 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SMAD6O43541 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 AC008040.2-201ENST00000461049 708 ntBASIC19.68■□□□□ 0.74
SMAD6O43541 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 Z85996.1-201ENST00000494644 937 ntBASIC19.68■□□□□ 0.74
SMAD6O43541 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.68■□□□□ 0.74
SMAD6O43541 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD6O43541 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD6O43541 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 FSCN1P1-201ENST00000568912 1481 ntBASIC19.67■□□□□ 0.74
SMAD6O43541 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 RCC2P6-201ENST00000526625 1557 ntBASIC19.67■□□□□ 0.74
SMAD6O43541 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD6O43541 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD6O43541 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms