Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 AC120498.9-201ENST00000339021 3867 ntBASIC16.79■□□□□ 0.28
PHF1O43189 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.79■□□□□ 0.28
PHF1O43189 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 AC087499.1-201ENST00000418141 1075 ntBASIC16.79■□□□□ 0.28
PHF1O43189 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.79■□□□□ 0.28
PHF1O43189 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.79■□□□□ 0.28
PHF1O43189 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.79■□□□□ 0.28
PHF1O43189 AC233702.5-201ENST00000584107 538 ntBASIC16.79■□□□□ 0.28
PHF1O43189 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.79■□□□□ 0.28
PHF1O43189 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PHF1O43189 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.79■□□□□ 0.28
PHF1O43189 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PHF1O43189 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.79■□□□□ 0.28
PHF1O43189 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PHF1O43189 KRT8P36-201ENST00000489121 1440 ntBASIC16.79■□□□□ 0.28
PHF1O43189 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.79■□□□□ 0.28
PHF1O43189 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.78■□□□□ 0.28
PHF1O43189 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PHF1O43189 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PHF1O43189 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
PHF1O43189 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 ARMC10P1-201ENST00000313754 855 ntBASIC16.78■□□□□ 0.28
PHF1O43189 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 RPS2P55-201ENST00000397318 883 ntBASIC16.78■□□□□ 0.28
PHF1O43189 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.78■□□□□ 0.28
PHF1O43189 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.78■□□□□ 0.28
PHF1O43189 AC107956.1-201ENST00000494359 873 ntBASIC16.78■□□□□ 0.28
PHF1O43189 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.78■□□□□ 0.28
PHF1O43189 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.78■□□□□ 0.28
PHF1O43189 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.78■□□□□ 0.28
PHF1O43189 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
PHF1O43189 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.78■□□□□ 0.28
PHF1O43189 AL158211.5-201ENST00000623583 2518 ntBASIC16.78■□□□□ 0.28
PHF1O43189 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PHF1O43189 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PHF1O43189 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.77■□□□□ 0.28
PHF1O43189 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.77■□□□□ 0.28
PHF1O43189 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
PHF1O43189 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.77■□□□□ 0.28
PHF1O43189 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PHF1O43189 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
PHF1O43189 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.77■□□□□ 0.28
PHF1O43189 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.77■□□□□ 0.28
PHF1O43189 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 KRT18P35-201ENST00000510488 1269 ntBASIC16.77■□□□□ 0.28
PHF1O43189 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.77■□□□□ 0.28
PHF1O43189 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PHF1O43189 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
PHF1O43189 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.77■□□□□ 0.27
PHF1O43189 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.77■□□□□ 0.27
PHF1O43189 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.77■□□□□ 0.27
PHF1O43189 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PHF1O43189 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHF1O43189 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PHF1O43189 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHF1O43189 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHF1O43189 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PHF1O43189 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.76■□□□□ 0.27
PHF1O43189 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.76■□□□□ 0.27
PHF1O43189 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PHF1O43189 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms