Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.32■■□□□ 1.16
ATP2A1O14983 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP2A1O14983 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ATP2A1O14983 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP2A1O14983 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.31■■□□□ 1.16
ATP2A1O14983 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC22.31■■□□□ 1.16
ATP2A1O14983 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.31■■□□□ 1.16
ATP2A1O14983 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
ATP2A1O14983 AC116562.4-202ENST00000641738 218 ntBASIC22.31■■□□□ 1.16
ATP2A1O14983 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP2A1O14983 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
ATP2A1O14983 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ATP2A1O14983 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP2A1O14983 AL691432.2-201ENST00000607222 2038 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ATP2A1O14983 ARMC10P1-201ENST00000313754 855 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ATP2A1O14983 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP2A1O14983 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.3■■□□□ 1.16
ATP2A1O14983 HMGA1P5-201ENST00000412453 271 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
ATP2A1O14983 LIN28AP1-201ENST00000429574 405 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.3■■□□□ 1.16
ATP2A1O14983 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.3■■□□□ 1.16
ATP2A1O14983 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.3■■□□□ 1.16
ATP2A1O14983 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.3■■□□□ 1.16
ATP2A1O14983 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
ATP2A1O14983 AC006011.2-201ENST00000621313 1158 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 AC010653.2-201ENST00000623505 997 ntBASIC22.3■■□□□ 1.16
ATP2A1O14983 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.3■■□□□ 1.16
ATP2A1O14983 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.3■■□□□ 1.16
ATP2A1O14983 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP2A1O14983 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.3■■□□□ 1.16
ATP2A1O14983 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP2A1O14983 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP2A1O14983 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.29■■□□□ 1.16
ATP2A1O14983 CCR12P-201ENST00000446203 998 ntBASIC22.29■■□□□ 1.16
ATP2A1O14983 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
ATP2A1O14983 AL023803.3-201ENST00000615559 522 ntBASIC22.29■■□□□ 1.16
ATP2A1O14983 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP2A1O14983 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP2A1O14983 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP2A1O14983 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP2A1O14983 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.28■■□□□ 1.16
ATP2A1O14983 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP2A1O14983 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
ATP2A1O14983 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP2A1O14983 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 AC092338.2-201ENST00000568827 1415 ntBASIC22.28■■□□□ 1.16
ATP2A1O14983 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP2A1O14983 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC22.28■■□□□ 1.16
ATP2A1O14983 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP2A1O14983 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.27■■□□□ 1.16
ATP2A1O14983 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ATP2A1O14983 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
ATP2A1O14983 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
ATP2A1O14983 BX664615.1-201ENST00000443558 458 ntBASIC22.27■■□□□ 1.16
ATP2A1O14983 ATP5G1P1-201ENST00000448724 379 ntBASIC22.27■■□□□ 1.16
ATP2A1O14983 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
ATP2A1O14983 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.27■■□□□ 1.16
ATP2A1O14983 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.27■■□□□ 1.16
ATP2A1O14983 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.27■■□□□ 1.16
ATP2A1O14983 GABARAPL3-202ENST00000624044 1851 ntBASIC22.27■■□□□ 1.16
ATP2A1O14983 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP2A1O14983 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms