Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM38O00635 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM38O00635 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.58■□□□□ 0.73
TRIM38O00635 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM38O00635 KRT16P5-201ENST00000455284 522 ntBASIC19.58■□□□□ 0.72
TRIM38O00635 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM38O00635 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM38O00635 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM38O00635 AP003071.4-201ENST00000562276 1284 ntBASIC19.58■□□□□ 0.72
TRIM38O00635 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRIM38O00635 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 NBPF21P-201ENST00000425093 1451 ntBASIC19.58■□□□□ 0.72
TRIM38O00635 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM38O00635 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TRIM38O00635 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRIM38O00635 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM38O00635 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM38O00635 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.57■□□□□ 0.72
TRIM38O00635 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 AL353708.3-201ENST00000610272 989 ntBASIC19.57■□□□□ 0.72
TRIM38O00635 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 AC098818.2-201ENST00000564925 2320 ntBASIC19.57■□□□□ 0.72
TRIM38O00635 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM38O00635 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM38O00635 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM38O00635 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRIM38O00635 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRIM38O00635 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRIM38O00635 AC092720.2-201ENST00000602388 1665 ntBASIC19.56■□□□□ 0.72
TRIM38O00635 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM38O00635 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRIM38O00635 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM38O00635 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM38O00635 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.56■□□□□ 0.72
TRIM38O00635 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM38O00635 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM38O00635 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TRIM38O00635 CD177P1-201ENST00000606252 935 ntBASIC19.56■□□□□ 0.72
TRIM38O00635 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM38O00635 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM38O00635 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM38O00635 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM38O00635 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 RCN1P1-201ENST00000400413 996 ntBASIC19.55■□□□□ 0.72
TRIM38O00635 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM38O00635 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM38O00635 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms