Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.44■□□□□ 0.54
CACNA1AO00555 AC009065.1-201ENST00000564055 1225 ntBASIC18.44■□□□□ 0.54
CACNA1AO00555 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.44■□□□□ 0.54
CACNA1AO00555 TFP1-202ENST00000475455 1573 ntBASIC18.44■□□□□ 0.54
CACNA1AO00555 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1AO00555 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CACNA1AO00555 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CACNA1AO00555 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1AO00555 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CACNA1AO00555 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 AC018712.1-201ENST00000455767 687 ntBASIC18.43■□□□□ 0.54
CACNA1AO00555 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA1AO00555 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CACNA1AO00555 TUBB8P6-201ENST00000436895 1288 ntBASIC18.43■□□□□ 0.54
CACNA1AO00555 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.43■□□□□ 0.54
CACNA1AO00555 AC074051.2-201ENST00000565115 352 ntBASIC18.43■□□□□ 0.54
CACNA1AO00555 MIR7706-201ENST00000613747 67 ntBASIC18.43■□□□□ 0.54
CACNA1AO00555 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.43■□□□□ 0.54
CACNA1AO00555 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1AO00555 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CACNA1AO00555 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CACNA1AO00555 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1AO00555 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.42■□□□□ 0.54
CACNA1AO00555 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.42■□□□□ 0.54
CACNA1AO00555 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1AO00555 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1AO00555 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.42■□□□□ 0.54
CACNA1AO00555 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1AO00555 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CACNA1AO00555 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CACNA1AO00555 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CACNA1AO00555 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1AO00555 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1AO00555 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.41■□□□□ 0.54
CACNA1AO00555 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.41■□□□□ 0.54
CACNA1AO00555 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1AO00555 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1AO00555 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.41■□□□□ 0.54
CACNA1AO00555 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CACNA1AO00555 DNAJB3-202ENST00000449667 1266 ntBASIC18.41■□□□□ 0.54
CACNA1AO00555 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.41■□□□□ 0.54
CACNA1AO00555 AC145285.3-201ENST00000564603 959 ntBASIC18.41■□□□□ 0.54
CACNA1AO00555 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.41■□□□□ 0.54
CACNA1AO00555 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.4■□□□□ 0.54
CACNA1AO00555 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1AO00555 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1AO00555 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1AO00555 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CACNA1AO00555 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1AO00555 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1AO00555 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.4■□□□□ 0.54
CACNA1AO00555 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA1AO00555 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA1AO00555 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1AO00555 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1AO00555 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA1AO00555 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1AO00555 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
CACNA1AO00555 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.4■□□□□ 0.54
CACNA1AO00555 AL035252.4-201ENST00000624174 288 ntBASIC18.4■□□□□ 0.54
CACNA1AO00555 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.39■□□□□ 0.54
CACNA1AO00555 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CACNA1AO00555 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 KRT8P20-201ENST00000423953 1409 ntBASIC18.39■□□□□ 0.53
CACNA1AO00555 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CACNA1AO00555 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA1AO00555 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA1AO00555 RNF126P1-202ENST00000569893 925 ntBASIC18.39■□□□□ 0.53
CACNA1AO00555 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA1AO00555 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms