Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SPDYE2BA6NHP3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 AC009947.2-201ENST00000444014 672 ntBASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 FAM86EP-206ENST00000510506 987 ntBASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SPDYE2BA6NHP3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 HOMER2P1-201ENST00000455653 964 ntBASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 AL441883.1-201ENST00000566170 1045 ntBASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.16■■□□□ 1.3
SPDYE2BA6NHP3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 AP003041.3-201ENST00000527151 707 ntBASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 AL023973.1-201ENST00000624619 620 ntBASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SPDYE2BA6NHP3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPDYE2BA6NHP3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SPDYE2BA6NHP3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SPDYE2BA6NHP3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 PCED1CP-201ENST00000419887 785 ntBASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SPDYE2BA6NHP3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
SPDYE2BA6NHP3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms