Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC119674.1-212ENST00000641155 993 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 ZNF652P1-201ENST00000442420 1309 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AC083843.3-201ENST00000623679 2186 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 AL672167.1-204ENST00000641875 3017 ntBASIC4.61□□□□□ -1.67
ATG4BQ9Y4P1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 IRF5P1-201ENST00000504852 2164 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 RNU6-883P-201ENST00000384597 107 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 OR1F12-201ENST00000402365 945 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 PSMC1P13-201ENST00000458195 985 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 RPS3AP41-201ENST00000462701 778 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC090686.1-201ENST00000481577 749 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 HMGB1P3-201ENST00000502802 616 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 CYCSP40-201ENST00000575927 294 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 MIR3934-201ENST00000579806 107 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 SNORA74C-1-201ENST00000580726 201 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AP001784.1-201ENST00000624107 428 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 HPVC1-201ENST00000629899 1198 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 AL163152.1-201ENST00000642001 374 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 OR5AC4P-202ENST00000642086 985 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 BX005019.1-201ENST00000561881 1810 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.6□□□□□ -1.67
ATG4BQ9Y4P1 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 COX6B1P1-201ENST00000415962 213 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 TMBIM7P-201ENST00000418074 855 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RGS17P1-201ENST00000423358 553 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 CR848007.2-201ENST00000424918 787 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC104837.2-201ENST00000427236 424 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AL772161.1-201ENST00000439130 476 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RPL31P44-201ENST00000447680 377 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 MTND5P8-201ENST00000449817 1083 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RPS3AP53-201ENST00000454716 778 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC092691.2-201ENST00000461787 803 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC007688.1-201ENST00000475592 759 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RN7SL809P-201ENST00000482040 297 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RN7SL558P-201ENST00000497468 299 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 RNU6-709P-201ENST00000517257 104 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 BRD9P1-201ENST00000529855 560 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC119501.1-201ENST00000603646 475 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC116651.1-201ENST00000609724 556 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC007497.1-201ENST00000610421 561 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AC087385.3-201ENST00000620477 187 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 AP002967.1-201ENST00000624203 539 ntBASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4BQ9Y4P1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.59□□□□□ -1.68
ATG4BQ9Y4P1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms