Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC022882.1-201ENST00000532142 501 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 HAUS8P1-201ENST00000549005 542 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC068020.1-201ENST00000594215 661 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC130352.1-201ENST00000602979 661 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 MEMO1P5-201ENST00000604810 406 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AL121612.2-201ENST00000612261 482 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC009163.6-201ENST00000612367 342 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AP006248.2-201ENST00000623309 592 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 RPL23AP61-201ENST00000623642 466 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AC006453.5-201ENST00000636451 619 ntBASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
RHBDD3Q9Y3P4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 MIR320B1-201ENST00000390209 79 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 MIR765-201ENST00000390226 114 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SKP125-201ENST00000410481 302 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 TBCAP2-201ENST00000416175 326 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RPS27P18-201ENST00000431701 247 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC092647.3-201ENST00000443044 633 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC239809.1-201ENST00000450470 217 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 OR2AF1P-201ENST00000454899 889 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC104629.2-201ENST00000468627 598 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SL97P-201ENST00000486780 299 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SL214P-201ENST00000487317 265 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC109462.1-201ENST00000491087 368 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 DEFB109F-201ENST00000491870 277 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC006499.3-201ENST00000506077 748 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC113430.1-201ENST00000506872 718 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 MRPS33P2-201ENST00000507850 322 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SKP147-201ENST00000517154 244 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 IGLV2-28-201ENST00000520681 304 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC243960.7-201ENST00000623532 707 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC119674.1-212ENST00000641155 993 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 AC008758.3-201ENST00000507003 1829 ntBASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RHBDD3Q9Y3P4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 MIR92A2-201ENST00000385299 75 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 RNA5SP345-201ENST00000410646 108 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 VN1R37P-201ENST00000419096 748 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AC093162.1-201ENST00000419682 124 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 E2F6P2-201ENST00000420708 748 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AC007064.3-201ENST00000422608 359 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 NPM1P26-201ENST00000426339 738 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 RN7SL629P-201ENST00000489622 285 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.2□□□□□ -1.74
RHBDD3Q9Y3P4 AC013701.1-201ENST00000522657 465 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms