Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC010460.2-201ENST00000509054 677 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 SOX5P1-201ENST00000524155 1127 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 OSBPL9P3-201ENST00000534523 595 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 FKBP1BP1-201ENST00000553366 325 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 CYCSP40-201ENST00000575927 294 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC010487.1-201ENST00000594408 1172 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC068790.7-201ENST00000602347 528 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC096947.1-201ENST00000603233 470 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AL158050.2-201ENST00000605336 568 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC090912.3-201ENST00000609775 533 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC012414.7-202ENST00000622705 1090 ntBASIC5.14□□□□□ -1.59
SIX4Q9UIU6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SIX4Q9UIU6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL442639.1-201ENST00000625030 1899 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AP000473.2-201ENST00000602659 1537 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 U3.35-201ENST00000408405 208 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 RPS26P4-201ENST00000431743 355 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL772161.1-201ENST00000439130 476 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 GYG1P1-201ENST00000460864 698 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC090686.1-201ENST00000481577 749 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 OR9N1P-202ENST00000494289 481 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 NAMPTP2-201ENST00000505629 1115 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC073358.1-201ENST00000505671 684 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 RNU6-334P-201ENST00000517072 102 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 OR8X1P-201ENST00000534542 869 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC012213.4-201ENST00000606457 354 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AL050303.3-201ENST00000613704 284 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC245389.2-201ENST00000616023 576 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC242843.1-201ENST00000618702 573 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 MIR6853-201ENST00000619642 74 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC091046.2-201ENST00000620775 665 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC010608.3-201ENST00000625048 527 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 DDX18P5-201ENST00000534547 1306 ntBASIC5.13□□□□□ -1.59
SIX4Q9UIU6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
SIX4Q9UIU6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC007382.1-201ENST00000624376 2618 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 PEX12P1-201ENST00000400284 1048 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 EIF4HP2-201ENST00000424380 563 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AL512637.2-201ENST00000431287 1256 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC006326.1-201ENST00000445465 787 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 MTND6P5-201ENST00000448266 512 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 RHEBP2-201ENST00000450289 600 ntBASIC5.12□□□□□ -1.59
SIX4Q9UIU6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.12□□□□□ -1.59
SIX4Q9UIU6 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms