Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLIP2Q9UDT6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AL034370.1-201ENST00000397254 1590 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 RN7SKP224-201ENST00000364140 325 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 SNORA70F-201ENST00000384142 135 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 MIR141-201ENST00000384975 95 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 RN7SKP199-201ENST00000410325 305 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC098592.2-201ENST00000413158 265 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 SEPT7P8-201ENST00000413308 775 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 ATG4AP1-201ENST00000416893 538 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC068287.1-201ENST00000430283 295 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 RPL21P6-201ENST00000479171 504 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AP000926.3-201ENST00000497201 299 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 RN7SKP92-201ENST00000517266 244 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 ELOCP28-201ENST00000590044 317 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 IMMP1LP1-201ENST00000605170 488 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AC097505.1-201ENST00000610199 565 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 MIR7641-1-201ENST00000627518 61 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 AL672167.1-203ENST00000641299 2975 ntBASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.56□□□□□ -1.52
CLIP2Q9UDT6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC016397.1-201ENST00000412463 242 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL591848.1-201ENST00000413092 322 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 EIF4HP2-201ENST00000424380 563 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC097523.2-201ENST00000435551 652 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL138787.1-202ENST00000437804 898 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC079168.2-201ENST00000453977 416 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL133372.1-201ENST00000493565 745 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC111000.3-201ENST00000508057 576 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AP001804.2-201ENST00000533932 910 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC122134.1-201ENST00000565664 1104 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AC067838.1-201ENST00000606064 577 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL159169.2-201ENST00000610061 1269 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 NF1P10-201ENST00000613227 742 ntBASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.55□□□□□ -1.52
CLIP2Q9UDT6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AL132640.2-201ENST00000559968 1698 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 OR4K15-201ENST00000305051 1216 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC008549.2-201ENST00000333482 706 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC140479.3-201ENST00000418944 1126 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 DNAJC19P7-201ENST00000428811 344 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 NMNAT1P2-201ENST00000435192 860 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 RPS6P2-201ENST00000454208 705 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 NIP7P2-201ENST00000485801 544 ntBASIC5.54□□□□□ -1.52
CLIP2Q9UDT6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms