Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC010201.1-201ENST00000605051 540 ntBASIC4.49□□□□□ -1.69
CHD7Q9P2D1 OR8G7P-201ENST00000616658 848 ntBASIC4.49□□□□□ -1.69
CHD7Q9P2D1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CHD7Q9P2D1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD7Q9P2D1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHD7Q9P2D1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 MAPK10-328ENST00000641553 4009 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC022893.2-201ENST00000564832 3296 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 RN7SKP156-201ENST00000410308 342 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 PCNPP4-201ENST00000414817 517 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC108032.1-201ENST00000416706 207 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC104260.2-201ENST00000623551 3497 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AL034370.1-201ENST00000397254 1590 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 BOLA3P4-201ENST00000418151 400 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC021876.1-201ENST00000425959 359 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC090589.1-201ENST00000473109 362 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 ACTR3P3-201ENST00000480448 893 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 DUXAP2-201ENST00000519198 589 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 AC005000.2-201ENST00000605468 310 ntBASIC4.48□□□□□ -1.69
CHD7Q9P2D1 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CHD7Q9P2D1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AL159987.2-201ENST00000432754 307 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 HSPD1P15-201ENST00000505573 1122 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 GMPSP1-201ENST00000514075 579 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 MIR30B-201ENST00000384850 88 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AL356968.2-201ENST00000412769 1257 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AL136164.3-201ENST00000624429 3978 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AC093829.1-201ENST00000506662 1618 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 OR5BE1P-201ENST00000425977 939 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 RPL35AP15-201ENST00000468042 339 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 RN7SKP13-201ENST00000515933 244 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 OR5BE1P-202ENST00000641168 1176 ntBASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD7Q9P2D1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CHD7Q9P2D1 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CHD7Q9P2D1 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 RNU1-20P-201ENST00000363314 162 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 RNU6-213P-201ENST00000384051 104 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AC006064.5-201ENST00000541782 248 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 EIF3EP2-201ENST00000423042 1814 ntBASIC4.46□□□□□ -1.7
CHD7Q9P2D1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD7Q9P2D1 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms