Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 SNORA2.3-201ENST00000383920 135 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 RPL23AP59-201ENST00000399415 461 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AL603865.2-201ENST00000401679 213 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 RPS27AP11-201ENST00000402798 447 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 SNORA77-201ENST00000408716 125 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 HMGB3P31-201ENST00000413333 595 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 USP9YP21-201ENST00000420603 432 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 OSTCP5-201ENST00000425293 453 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 DPY19L1P2-201ENST00000426647 915 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC008072.1-201ENST00000434254 824 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 USP9YP24-201ENST00000434374 697 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 CACYBPP1-201ENST00000438592 684 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 USP9YP17-201ENST00000444617 696 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 EIF2S2P2-201ENST00000447161 982 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 RN7SL443P-201ENST00000464331 290 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 RPL6P9-201ENST00000466502 859 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 RPS23P1-201ENST00000491662 432 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 RNU6-1028P-201ENST00000517164 93 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 MIR4433B-201ENST00000581329 102 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC011487.3-201ENST00000593607 453 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC009974.1-201ENST00000608881 455 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC006946.3-201ENST00000609791 756 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 MIR6748-201ENST00000610433 71 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AL356274.1-201ENST00000617064 410 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC145207.9-201ENST00000623802 325 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC097655.1-201ENST00000635075 318 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 OR6C71P-202ENST00000641886 1107 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC004656.1-201ENST00000568479 4951 ntBASIC5.77□□□□□ -1.49
COL20A1Q9P218 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL20A1Q9P218 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.77□□□□□ -1.49
COL20A1Q9P218 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 RN7SKP149-201ENST00000363008 344 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 RNA5SP27-201ENST00000363839 119 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 RNA5SP223-201ENST00000365174 120 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 RNA5SP87-201ENST00000384155 118 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 RNU6-185P-201ENST00000384421 107 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 RN7SKP199-201ENST00000410325 305 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 NANOGP5-201ENST00000424456 877 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC009238.2-201ENST00000431026 355 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AL772161.1-201ENST00000439130 476 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 ELOCP13-201ENST00000443934 329 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AL354714.3-201ENST00000447284 493 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AL035407.2-201ENST00000454090 378 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC021146.5-201ENST00000503544 545 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 OR7H2P-201ENST00000513483 306 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC027369.5-201ENST00000533838 755 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 HMGN2P47-201ENST00000559378 272 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AL031320.1-201ENST00000604177 357 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC098935.2-201ENST00000604222 466 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.76□□□□□ -1.49
COL20A1Q9P218 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL20A1Q9P218 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.76□□□□□ -1.49
COL20A1Q9P218 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL20A1Q9P218 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms